Guide to the Human Genome
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Name: ATF2 Sequence: fasta or formatted (505aa) NCBI GI: 22538422
Description:

activating transcription factor 2

Referenced in:

CREB / ATF Family
MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         41           3
 C cysteine            1.0          5           1
 D aspartate           4.4         22           2
 E glutamate           5.7         29           2
 F phenylalanine       2.0         10           1
 G glycine             3.4         17           1
 H histidine           3.2         16           1
 I isoleucine          3.2         16           2
 K lysine              5.7         29           2
 L leucine             7.5         38           3
 M methionine          2.0         10           1
 N asparagine          3.4         17           1
 P proline            10.1         51           2
 Q glutamine           6.7         34           2
 R arginine            4.6         23           4
 S serine             12.5         63           2
 T threonine           8.1         41           2
 V valine              7.7         39           2
 W tryptophan          0.4          2           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating transcription factor 2 
ATF7                  0.476   activating transcription factor 7 isoform 2 
ATF7                  0.472   activating transcription factor 7 isoform 1 
ATF7                  0.458   activating transcription factor 7 isoform 3 
CREB5                 0.329   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.329   cAMP responsive element binding protein 5 isoform al...
CREB5                 0.217   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.182   cAMP responsive element binding protein 5 isoform de...
MUC17                 0.043   mucin 17 
MUC5B                 0.041   mucin 5, subtype B, tracheobronchial 
FOSB                  0.035   FBJ murine osteosarcoma viral oncogene homolog B is...
FOSL2                 0.035   FOS-like antigen 2 
JUN                   0.033   jun oncogene 
JUND                  0.033   jun D proto-oncogene 
ATF3                  0.033   activating transcription factor 3 isoform 1 
ATF3                  0.033   activating transcription factor 3 isoform 1 
FOSL1                 0.032   FOS-like antigen 1 
CREB3L1               0.030   cAMP responsive element binding protein 3-like 1 [Ho...
TCERG1                0.030   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.030   transcription elongation regulator 1 isoform 1 [Homo...
JUNB                  0.030   jun B proto-oncogene 
MUC5AC                0.029   mucin 5AC 
FOS                   0.028   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
COL27A1               0.028   collagen, type XXVII, alpha 1 
BAT2D1                0.028   HBxAg transactivated protein 2 
JDP2                  0.027   Jun dimerization protein 2 isoform b 
JDP2                  0.027   Jun dimerization protein 2 isoform a 
JDP2                  0.027   Jun dimerization protein 2 isoform a 
JDP2                  0.027   Jun dimerization protein 2 isoform a 
EP300                 0.027   E1A binding protein p300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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