Guide to the Human Genome
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Name: FOXP3 Sequence: fasta or formatted (396aa) NCBI GI: 167466190
Description:

forkhead box P3 isoform b

Referenced in:

FOX Family

Other entries for this name:
alt prot [431aa] forkhead box P3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         39           2
 C cysteine            2.3          9           2
 D aspartate           2.8         11           1
 E glutamate           5.3         21           2
 F phenylalanine       4.3         17           2
 G glycine             6.3         25           2
 H histidine           3.5         14           1
 I isoleucine          1.8          7           1
 K lysine              5.1         20           2
 L leucine             9.8         39           2
 M methionine          2.3          9           1
 N asparagine          3.3         13           1
 P proline            10.6         42           2
 Q glutamine           3.8         15           2
 R arginine            6.3         25           2
 S serine              9.8         39           4
 T threonine           4.5         18           2
 V valine              5.1         20           2
 W tryptophan          2.3          9           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P3 isoform b 
FOXP3                 0.977   forkhead box P3 isoform a 
FOXP1                 0.258   forkhead box P1 isoform 1 
FOXP2                 0.246   forkhead box P2 isoform I 
FOXP2                 0.246   forkhead box P2 isoform III 
FOXP2                 0.246   forkhead box P2 isoform II 
FOXP4                 0.244   forkhead box P4 isoform 2 
FOXP4                 0.242   forkhead box P4 isoform 3 
FOXP4                 0.242   forkhead box P4 isoform 1 
FOXJ3                 0.075   forkhead box J3 
FOXJ2                 0.074   forkhead box J2 
FOXN3                 0.071   checkpoint suppressor 1 isoform 1 
FOXN3                 0.071   checkpoint suppressor 1 isoform 2 
FOXJ1                 0.071   forkhead box J1 
FOXC2                 0.069   forkhead box C2 
FOXE3                 0.068   forkhead box E3 
FOXL1                 0.068   forkhead box L1 
FOXC1                 0.068   forkhead box C1 
FOXI3                 0.066   forkhead box I3 
FOXE1                 0.065   forkhead box E1 
FOXG1                 0.065   forkhead box G1 
FOXD2                 0.065   forkhead box D2 
FOXL2                 0.065   forkhead box L2 
FOXA1                 0.064   forkhead box A1 
FOXK2                 0.063   forkhead box K2 
FOXF1                 0.063   forkhead box F1 
FOXI2                 0.063   forkhead box I2 
FOXA2                 0.063   forkhead box A2 isoform 2 
FOXI1                 0.063   forkhead box I1 isoform a 
FOXA2                 0.063   forkhead box A2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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