Guide to the Human Genome
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Name: HLF Sequence: fasta or formatted (295aa) NCBI GI: 4504421
Description:

hepatic leukemia factor

Referenced in:

Pituitary

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         21           2
 C cysteine            0.7          2           1
 D aspartate           7.5         22           2
 E glutamate           6.8         20           3
 F phenylalanine       3.1          9           1
 G glycine             3.7         11           1
 H histidine           2.4          7           2
 I isoleucine          4.1         12           1
 K lysine              8.1         24           2
 L leucine            10.5         31           2
 M methionine          2.7          8           1
 N asparagine          4.1         12           2
 P proline            13.2         39           3
 Q glutamine           3.7         11           1
 R arginine            6.4         19           3
 S serine              8.5         25           2
 T threonine           2.4          7           1
 V valine              2.4          7           1
 W tryptophan          0.7          2           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hepatic leukemia factor 
TEF                   0.469   thyrotrophic embryonic factor isoform 2 
TEF                   0.466   thyrotrophic embryonic factor isoform 1 
DBP                   0.383   D site of albumin promoter (albumin D-box) binding p...
LOC100291212          0.064   PREDICTED: hypothetical protein XP_002347943 
NFIL3                 0.064   nuclear factor, interleukin 3 regulated 
CEBPA                 0.041   CCAAT/enhancer binding protein alpha 
MLXIPL                0.038   Williams Beuren syndrome chromosome region 14 isofor...
BATF                  0.036   basic leucine zipper transcription factor, ATF-like [...
BATF3                 0.036   basic leucine zipper transcription factor, ATF-like 3...
MLXIPL                0.036   Williams Beuren syndrome chromosome region 14 isofor...
CEBPG                 0.036   CCAAT/enhancer binding protein gamma 
CEBPB                 0.034   CCAAT/enhancer binding protein beta 
FOSL2                 0.034   FOS-like antigen 2 
FOS                   0.033   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
MLXIPL                0.031   Williams Beuren syndrome chromosome region 14 isofor...
ATF2                  0.031   activating transcription factor 2 
MLXIPL                0.029   Williams Beuren syndrome chromosome region 14 isofor...
ATF4                  0.027   activating transcription factor 4 
ATF4                  0.027   activating transcription factor 4 
FOSB                  0.027   FBJ murine osteosarcoma viral oncogene homolog B is...
MAP7                  0.026   microtubule-associated protein 7 
BATF2                 0.026   basic leucine zipper transcription factor, ATF-like ...
SRRM1                 0.024   serine/arginine repetitive matrix 1 
ASAP2                 0.024   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
CEBPD                 0.024   CCAAT/enhancer binding protein delta 
ASAP2                 0.024   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
RERE                  0.022   atrophin-1 like protein isoform b 
RERE                  0.022   atrophin-1 like protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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