Guide to the Human Genome
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Name: BATF3 Sequence: fasta or formatted (127aa) NCBI GI: 8924246
Description:

basic leucine zipper transcription factor, ATF-like 3

Referenced in:

Jun / Fos Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1          9           2
 C cysteine            2.4          3           1
 D aspartate           3.9          5           3
 E glutamate          10.2         13           2
 F phenylalanine       0.8          1           1
 G glycine             3.9          5           1
 H histidine           2.4          3           1
 I isoleucine          0.8          1           1
 K lysine              7.9         10           2
 L leucine            10.2         13           3
 M methionine          3.1          4           1
 N asparagine          3.1          4           1
 P proline            11.0         14           2
 Q glutamine           9.4         12           3
 R arginine            9.4         12           3
 S serine              4.7          6           1
 T threonine           3.1          4           1
 V valine              5.5          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basic leucine zipper transcription factor, ATF-like 3... 
BATF                  0.319   basic leucine zipper transcription factor, ATF-like [...
BATF2                 0.221   basic leucine zipper transcription factor, ATF-like ...
ATF3                  0.166   activating transcription factor 3 isoform 1 
ATF3                  0.166   activating transcription factor 3 isoform 1 
JDP2                  0.153   Jun dimerization protein 2 isoform b 
JDP2                  0.153   Jun dimerization protein 2 isoform a 
JDP2                  0.153   Jun dimerization protein 2 isoform a 
JDP2                  0.153   Jun dimerization protein 2 isoform a 
FOSL2                 0.145   FOS-like antigen 2 
FOSL1                 0.140   FOS-like antigen 1 
FOSB                  0.132   FBJ murine osteosarcoma viral oncogene homolog B is...
FOS                   0.128   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
CEBPG                 0.106   CCAAT/enhancer binding protein gamma 
CREB3L2               0.106   cAMP responsive element binding protein 3-like 2 [Ho...
ATF7                  0.102   activating transcription factor 7 isoform 3 
ATF7                  0.102   activating transcription factor 7 isoform 2 
ATF7                  0.102   activating transcription factor 7 isoform 1 
JUN                   0.098   jun oncogene 
JUND                  0.094   jun D proto-oncogene 
CREB5                 0.094   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.094   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.094   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.094   cAMP responsive element binding protein 5 isoform al...
HLF                   0.089   hepatic leukemia factor 
DBP                   0.089   D site of albumin promoter (albumin D-box) binding p...
ATF4                  0.085   activating transcription factor 4 
ATF4                  0.085   activating transcription factor 4 
TEF                   0.081   thyrotrophic embryonic factor isoform 2 
XBP1                  0.081   X-box binding protein 1 isoform XBP1(U) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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