Guide to the Human Genome
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Name: CREB5 Sequence: fasta or formatted (501aa) NCBI GI: 59938774
Description:

cAMP responsive element binding protein 5 isoform beta

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [508aa] cAMP responsive element binding protein 5 isoform alpha
alt prot [475aa] cAMP responsive element binding protein 5 isoform gamma
alt prot [369aa] cAMP responsive element binding protein 5 isoform delta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         28           3
 C cysteine            1.6          8           1
 D aspartate           2.2         11           1
 E glutamate           5.2         26           3
 F phenylalanine       1.4          7           1
 G glycine             4.0         20           2
 H histidine           9.2         46           3
 I isoleucine          2.4         12           1
 K lysine              3.4         17           2
 L leucine             7.2         36           3
 M methionine          6.0         30           2
 N asparagine          4.8         24           1
 P proline            10.6         53           2
 Q glutamine           9.4         47           3
 R arginine            5.2         26           4
 S serine             10.0         50           3
 T threonine           7.0         35           2
 V valine              4.4         22           2
 W tryptophan          0.2          1           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element binding protein 5 isoform be... 
CREB5                 1.000   cAMP responsive element binding protein 5 isoform al...
CREB5                 0.945   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.704   cAMP responsive element binding protein 5 isoform de...
ATF7                  0.321   activating transcription factor 7 isoform 3 
ATF7                  0.314   activating transcription factor 7 isoform 2 
ATF2                  0.313   activating transcription factor 2 
ATF7                  0.311   activating transcription factor 7 isoform 1 
RBM33                 0.042   RNA binding motif protein 33 
MAFB                  0.038   transcription factor MAFB 
LOC100291393          0.036   PREDICTED: hypothetical protein XP_002347924 
PHLDA1                0.036   pleckstrin homology-like domain, family A, member 1 ...
NUFIP2                0.036   nuclear fragile X mental retardation protein interac...
FOXB2                 0.035   forkhead box B2 
FOSL1                 0.035   FOS-like antigen 1 
JUN                   0.034   jun oncogene 
LOC100131525          0.034   PREDICTED: hypothetical protein 
HRG                   0.034   histidine-rich glycoprotein precursor 
FOSL2                 0.033   FOS-like antigen 2 
IQSEC1                0.030   IQ motif and Sec7 domain 1 isoform a 
FOXJ3                 0.030   forkhead box J3 
LOC100293557          0.029   PREDICTED: hypothetical protein 
LOC100288473          0.029   PREDICTED: hypothetical protein XP_002343336 
ATF3                  0.029   activating transcription factor 3 isoform 1 
ATF3                  0.029   activating transcription factor 3 isoform 1 
FOSB                  0.028   FBJ murine osteosarcoma viral oncogene homolog B is...
RNF111                0.028   ring finger protein 111 
OTX1                  0.028   orthodenticle homeobox 1 
CEBPA                 0.028   CCAAT/enhancer binding protein alpha 
JUND                  0.027   jun D proto-oncogene 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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