SYNJ1 16101

Name: SYNJ1	Sequence: fasta or formatted (1350aa)		NCBI GI: 237757308
Description: synaptojanin 1 isoform b		Referenced in: Inositol Pathways Synapses
Other entries for this name: alt prot [1612aa] synaptojanin 1 isoform a alt prot [1295aa] synaptojanin 1 isoform c alt prot [1526aa] synaptojanin 1 isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 102 2 C cysteine 1.5 20 1 D aspartate 5.0 67 2 E glutamate 6.1 83 3 F phenylalanine 4.6 62 2 G glycine 6.8 92 3 H histidine 1.9 25 1 I isoleucine 4.3 58 2 K lysine 5.3 72 2 L leucine 9.1 123 3 M methionine 1.8 24 1 N asparagine 3.5 47 2 P proline 7.3 99 4 Q glutamine 5.0 68 2 R arginine 6.4 87 5 S serine 9.7 131 4 T threonine 5.0 67 2 V valine 5.9 79 2 W tryptophan 1.3 18 1 Y tyrosine 1.9 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptojanin 1 isoform b SYNJ1 0.996 synaptojanin 1 isoform a SYNJ1 0.952 synaptojanin 1 isoform c SYNJ1 0.912 synaptojanin 1 isoform d SYNJ2 0.428 synaptojanin 2 INPP5B 0.069 inositol polyphosphate-5-phosphatase, 75kDa precurs... OCRL 0.067 phosphatidylinositol polyphosphate 5-phosphatase iso... OCRL 0.067 phosphatidylinositol polyphosphate 5-phosphatase iso... SACM1L 0.066 suppressor of actin 1 INPP5F 0.062 inositol polyphosphate-5-phosphatase F INPP5D 0.057 SH2 containing inositol phosphatase isoform b INPP5D 0.057 SH2 containing inositol phosphatase isoform a INPP5J 0.051 phosphatidylinositol (4,5) bisphosphate 5-phosphatas... INPPL1 0.048 inositol polyphosphate phosphatase-like 1 INPP5E 0.041 inositol polyphosphate-5-phosphatase E INPP5K 0.040 inositol polyphosphate-5-phosphatase K isoform 1 [Ho... INPP5K 0.037 inositol polyphosphate-5-phosphatase K isoform 2 [H... INPP5K 0.037 inositol polyphosphate-5-phosphatase K isoform 2 [Ho... PRB2 0.025 proline-rich protein BstNI subfamily 2 RERE 0.025 atrophin-1 like protein isoform b RERE 0.025 atrophin-1 like protein isoform a RERE 0.025 atrophin-1 like protein isoform a NACA 0.025 nascent polypeptide-associated complex alpha subuni... PRB1 0.024 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRG4 0.024 proteoglycan 4 isoform D PRG4 0.024 proteoglycan 4 isoform C PRG4 0.024 proteoglycan 4 isoform B PRG4 0.024 proteoglycan 4 isoform A PCLO 0.023 piccolo isoform 2 PCLO 0.023 piccolo isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.