SYNJ1 16103

Name: SYNJ1	Sequence: fasta or formatted (1295aa)		NCBI GI: 237757312
Description: synaptojanin 1 isoform c		Referenced in: Inositol Pathways Synapses
Other entries for this name: alt prot [1350aa] synaptojanin 1 isoform b alt prot [1612aa] synaptojanin 1 isoform a alt prot [1526aa] synaptojanin 1 isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 96 2 C cysteine 1.3 17 1 D aspartate 5.1 66 2 E glutamate 6.1 79 3 F phenylalanine 4.8 62 2 G glycine 6.3 82 2 H histidine 1.9 25 1 I isoleucine 4.4 57 2 K lysine 5.4 70 2 L leucine 9.5 123 3 M methionine 1.7 22 1 N asparagine 3.6 47 2 P proline 7.3 95 4 Q glutamine 5.3 68 2 R arginine 5.6 73 3 S serine 9.7 126 4 T threonine 5.2 67 2 V valine 6.0 78 2 W tryptophan 1.2 16 1 Y tyrosine 2.0 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptojanin 1 isoform c SYNJ1 0.996 synaptojanin 1 isoform b SYNJ1 0.991 synaptojanin 1 isoform a SYNJ1 0.958 synaptojanin 1 isoform d SYNJ2 0.445 synaptojanin 2 INPP5B 0.072 inositol polyphosphate-5-phosphatase, 75kDa precurs... OCRL 0.070 phosphatidylinositol polyphosphate 5-phosphatase iso... OCRL 0.070 phosphatidylinositol polyphosphate 5-phosphatase iso... SACM1L 0.069 suppressor of actin 1 INPP5F 0.065 inositol polyphosphate-5-phosphatase F INPP5D 0.056 SH2 containing inositol phosphatase isoform b INPP5D 0.056 SH2 containing inositol phosphatase isoform a INPP5J 0.052 phosphatidylinositol (4,5) bisphosphate 5-phosphatas... INPPL1 0.052 inositol polyphosphate phosphatase-like 1 INPP5E 0.043 inositol polyphosphate-5-phosphatase E INPP5K 0.042 inositol polyphosphate-5-phosphatase K isoform 1 [Ho... FIG4 0.041 Sac domain-containing inositol phosphatase 3 INPP5K 0.039 inositol polyphosphate-5-phosphatase K isoform 2 [H... INPP5K 0.039 inositol polyphosphate-5-phosphatase K isoform 2 [Ho... PRB2 0.028 proline-rich protein BstNI subfamily 2 PRG4 0.027 proteoglycan 4 isoform D PRG4 0.027 proteoglycan 4 isoform C PRG4 0.027 proteoglycan 4 isoform B PRG4 0.027 proteoglycan 4 isoform A NACA 0.026 nascent polypeptide-associated complex alpha subuni... PRB1 0.025 proline-rich protein BstNI subfamily 1 isoform 1 pre... WBP11 0.024 WW domain binding protein 11 MUC2 0.023 mucin 2 precursor PRB3 0.023 proline-rich protein BstNI subfamily 3 precursor [H... PTPN23 0.023 protein tyrosine phosphatase, non-receptor type 23 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.