Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CREB5 Sequence: fasta or formatted (369aa) NCBI GI: 59938776
Description:

cAMP responsive element binding protein 5 isoform delta

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [508aa] cAMP responsive element binding protein 5 isoform alpha
alt prot [475aa] cAMP responsive element binding protein 5 isoform gamma
alt prot [501aa] cAMP responsive element binding protein 5 isoform beta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         22           3
 C cysteine            1.4          5           1
 D aspartate           1.6          6           1
 E glutamate           3.8         14           2
 F phenylalanine       0.5          2           1
 G glycine             4.1         15           2
 H histidine          10.3         38           3
 I isoleucine          1.6          6           1
 K lysine              3.0         11           2
 L leucine             7.0         26           3
 M methionine          7.0         26           2
 N asparagine          4.6         17           1
 P proline            11.4         42           2
 Q glutamine          10.0         37           3
 R arginine            5.1         19           4
 S serine             10.3         38           3
 T threonine           6.8         25           2
 V valine              4.6         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            0.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element binding protein 5 isoform de... 
CREB5                 0.957   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.957   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.957   cAMP responsive element binding protein 5 isoform al...
ATF7                  0.260   activating transcription factor 7 isoform 3 
ATF7                  0.260   activating transcription factor 7 isoform 2 
ATF7                  0.260   activating transcription factor 7 isoform 1 
ATF2                  0.236   activating transcription factor 2 
RBM33                 0.057   RNA binding motif protein 33 
MAFB                  0.052   transcription factor MAFB 
LOC100291393          0.049   PREDICTED: hypothetical protein XP_002347924 
PHLDA1                0.049   pleckstrin homology-like domain, family A, member 1 ...
NUFIP2                0.049   nuclear fragile X mental retardation protein interac...
FOXB2                 0.048   forkhead box B2 
FOSL1                 0.048   FOS-like antigen 1 
JUN                   0.047   jun oncogene 
LOC100131525          0.047   PREDICTED: hypothetical protein 
HRG                   0.047   histidine-rich glycoprotein precursor 
FOSL2                 0.045   FOS-like antigen 2 
OTX1                  0.043   orthodenticle homeobox 1 
IQSEC1                0.041   IQ motif and Sec7 domain 1 isoform a 
FOXJ3                 0.041   forkhead box J3 
LOC100293557          0.040   PREDICTED: hypothetical protein 
LOC100288473          0.040   PREDICTED: hypothetical protein XP_002343336 
ATF3                  0.040   activating transcription factor 3 isoform 1 
ATF3                  0.040   activating transcription factor 3 isoform 1 
FOSB                  0.039   FBJ murine osteosarcoma viral oncogene homolog B is...
RNF111                0.039   ring finger protein 111 
CEBPA                 0.039   CCAAT/enhancer binding protein alpha 
JUND                  0.037   jun D proto-oncogene 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press