Guide to the Human Genome
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Name: MLL5 Sequence: fasta or formatted (1858aa) NCBI GI: 91199543
Description:

myeloid/lymphoid or mixed-lineage leukemia 5

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt mRNA [1858aa] myeloid/lymphoid or mixed-lineage leukemia 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         92           3
 C cysteine            1.9         36           2
 D aspartate           3.9         73           2
 E glutamate           6.8        126           3
 F phenylalanine       2.4         45           2
 G glycine             5.4        100           3
 H histidine           4.3         79           3
 I isoleucine          3.7         68           2
 K lysine              5.8        108           3
 L leucine             6.0        111           3
 M methionine          1.3         24           1
 N asparagine          5.1         95           3
 P proline            11.3        210           9
 Q glutamine           5.9        109           2
 R arginine            4.8         90           3
 S serine             10.9        202           3
 T threonine           7.9        147           3
 V valine              4.7         88           3
 W tryptophan          0.5          9           1
 Y tyrosine            2.5         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  1.000   myeloid/lymphoid or mixed-lineage leukemia 5 
SETD5                 0.146   SET domain containing 5 
BRD4                  0.019   bromodomain-containing protein 4 isoform long 
ATN1                  0.018   atrophin-1 
ATN1                  0.018   atrophin-1 
FMN2                  0.018   formin 2 
RERE                  0.018   atrophin-1 like protein isoform a 
RERE                  0.018   atrophin-1 like protein isoform a 
RERE                  0.018   atrophin-1 like protein isoform b 
SF1                   0.017   splicing factor 1 isoform 2 
IQSEC2                0.017   IQ motif and Sec7 domain 2 isoform1 
PTPN23                0.017   protein tyrosine phosphatase, non-receptor type 23 [...
RAPH1                 0.016   Ras association and pleckstrin homology domains 1 is...
SF1                   0.016   splicing factor 1 isoform 1 
RBM33                 0.016   RNA binding motif protein 33 
SFPQ                  0.015   splicing factor proline/glutamine rich (polypyrimidin...
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
ASH1L                 0.015   absent, small, or homeotic 1-like 
CCNK                  0.015   cyclin K isoform 1 
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
CBLL1                 0.014   Cas-Br-M (murine) ecotropic retroviral transforming...
WIPF3                 0.014   WAS/WASL interacting protein family, member 3 [Homo...
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
KDM6B                 0.014   lysine (K)-specific demethylase 6B 
BCL9L                 0.014   B-cell CLL/lymphoma 9-like 
SF3A2                 0.014   splicing factor 3a, subunit 2 
PRG4                  0.013   proteoglycan 4 isoform B 
PRG4                  0.013   proteoglycan 4 isoform A 
PRG4                  0.013   proteoglycan 4 isoform D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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