Guide to the Human Genome
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Name: RALGDS Sequence: fasta or formatted (859aa) NCBI GI: 108796058
Description:

ral guanine nucleotide dissociation stimulator isoform 2

Referenced in:

Ras

Other entries for this name:
alt prot [914aa] ral guanine nucleotide dissociation stimulator isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         71           2
 C cysteine            2.1         18           2
 D aspartate           4.4         38           2
 E glutamate           8.1         70           4
 F phenylalanine       3.0         26           1
 G glycine             4.5         39           2
 H histidine           1.7         15           2
 I isoleucine          4.4         38           2
 K lysine              5.9         51           2
 L leucine            10.2         88           3
 M methionine          1.3         11           2
 N asparagine          3.6         31           2
 P proline             7.6         65           2
 Q glutamine           4.4         38           2
 R arginine            4.5         39           2
 S serine             10.8         93           4
 T threonine           5.5         47           3
 V valine              5.6         48           2
 W tryptophan          1.0          9           1
 Y tyrosine            2.8         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ral guanine nucleotide dissociation stimulator isof... 
RALGDS                0.993   ral guanine nucleotide dissociation stimulator isofo...
RGL1                  0.294   ral guanine nucleotide dissociation stimulator-like ...
RGL3                  0.211   ral guanine nucleotide dissociation stimulator-like...
RGL3                  0.210   ral guanine nucleotide dissociation stimulator-like...
RGL2                  0.208   ral guanine nucleotide dissociation stimulator-like 2...
RGL4                  0.180   ral guanine nucleotide dissociation stimulator-like ...
RALGPS1               0.056   Ral GEF with PH domain and SH3 binding motif 1 
RASGRF2               0.049   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.047   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.047   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.047   Ras protein-specific guanine nucleotide-releasing fa...
RALGPS2               0.044   Ral GEF with PH domain and SH3 binding motif 2 [Homo...
SOS2                  0.037   son of sevenless homolog 2 
RAPGEF1               0.036   guanine nucleotide-releasing factor 2 isoform b [Hom...
RAPGEF1               0.036   guanine nucleotide-releasing factor 2 isoform a [Hom...
SOS1                  0.035   son of sevenless homolog 1 
RASGRP2               0.034   RAS guanyl releasing protein 2 
RASGRP2               0.034   RAS guanyl releasing protein 2 
RASGRP2               0.034   RAS guanyl releasing protein 2 
DGKK                  0.031   diacylglycerol kinase kappa 
SELV                  0.030   selenoprotein V 
RAPGEF6               0.030   PDZ domain-containing guanine nucleotide exchange fa...
CDKN1C                0.029   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.029   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.029   cyclin-dependent kinase inhibitor 1C isoform a 
RAPGEF2               0.029   Rap guanine nucleotide exchange factor 2 
RASGRP3               0.025   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.025   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RASGRP3               0.025   RAS guanyl releasing protein 3 (calcium and DAG-regul...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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