PRDM2 12012

Name: PRDM2	Sequence: fasta or formatted (1718aa)		NCBI GI: 20336258
Description: retinoblastoma protein-binding zinc finger protein isoform a		Referenced in: RB1 and Related Functions Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [1682aa] retinoblastoma protein-binding zinc finger protein isoform b alt prot [226aa] retinoblastoma protein-binding zinc finger protein isoform d alt prot [1481aa] retinoblastoma protein-binding zinc finger protein isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 117 4 C cysteine 2.4 41 1 D aspartate 4.4 75 5 E glutamate 8.7 150 9 F phenylalanine 2.8 48 2 G glycine 4.2 73 2 H histidine 2.6 44 2 I isoleucine 3.2 55 1 K lysine 8.8 151 3 L leucine 7.3 125 2 M methionine 1.6 27 1 N asparagine 4.4 76 3 P proline 9.4 161 4 Q glutamine 4.1 71 2 R arginine 4.1 71 3 S serine 12.0 207 12 T threonine 5.6 97 2 V valine 5.3 91 3 W tryptophan 0.7 12 1 Y tyrosine 1.5 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.977 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.857 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.096 retinoblastoma protein-binding zinc finger protein ... PRDM9 0.021 PR domain containing 9 PRDM5 0.019 PR domain containing 5 PRDM7 0.018 PR domain containing 7 isoform 1 MUC2 0.017 mucin 2 precursor PRDM1 0.017 PR domain containing 1, with ZNF domain isoform 1 [... PRDM6 0.016 PR domain containing 6 SALL1 0.016 sal-like 1 isoform b SALL1 0.016 sal-like 1 isoform a BCL6B 0.016 B-cell CLL/lymphoma 6, member B (zinc finger protein... ATN1 0.015 atrophin-1 ATN1 0.015 atrophin-1 WASF2 0.015 WAS protein family, member 2 ZNF362 0.015 zinc finger protein 362 FLJ22184 0.015 PREDICTED: hypothetical protein LOC80164 PRDM12 0.014 PR domain containing 12 ZBTB17 0.014 zinc finger and BTB domain containing 17 PRDM16 0.014 PR domain containing 16 isoform 2 PRDM16 0.014 PR domain containing 16 isoform 1 ZNF384 0.014 nuclear matrix transcription factor 4 isoform d [Ho... FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 FMN2 0.014 formin 2 ZNF454 0.014 zinc finger protein 454 PRG4 0.014 proteoglycan 4 isoform D PRG4 0.014 proteoglycan 4 isoform C PRG4 0.014 proteoglycan 4 isoform B PRG4 0.014 proteoglycan 4 isoform A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.