SYNJ1 16102

Name: SYNJ1	Sequence: fasta or formatted (1612aa)		NCBI GI: 237757310
Description: synaptojanin 1 isoform a		Referenced in: Inositol Pathways Synapses
Other entries for this name: alt prot [1350aa] synaptojanin 1 isoform b alt prot [1295aa] synaptojanin 1 isoform c alt prot [1526aa] synaptojanin 1 isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 114 2 C cysteine 1.4 23 1 D aspartate 5.0 81 2 E glutamate 5.9 95 4 F phenylalanine 4.8 77 2 G glycine 6.5 105 3 H histidine 1.6 26 1 I isoleucine 4.0 65 2 K lysine 5.5 88 2 L leucine 9.1 146 3 M methionine 1.7 27 1 N asparagine 3.8 61 2 P proline 8.3 133 5 Q glutamine 4.7 76 2 R arginine 6.1 98 5 S serine 10.6 171 4 T threonine 5.4 87 2 V valine 5.7 92 2 W tryptophan 1.3 21 1 Y tyrosine 1.6 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptojanin 1 isoform a SYNJ1 0.930 synaptojanin 1 isoform d SYNJ1 0.832 synaptojanin 1 isoform b SYNJ1 0.792 synaptojanin 1 isoform c SYNJ2 0.357 synaptojanin 2 INPP5B 0.058 inositol polyphosphate-5-phosphatase, 75kDa precurs... OCRL 0.056 phosphatidylinositol polyphosphate 5-phosphatase iso... OCRL 0.056 phosphatidylinositol polyphosphate 5-phosphatase iso... SACM1L 0.055 suppressor of actin 1 INPP5F 0.052 inositol polyphosphate-5-phosphatase F INPP5D 0.047 SH2 containing inositol phosphatase isoform b INPP5D 0.047 SH2 containing inositol phosphatase isoform a INPP5J 0.043 phosphatidylinositol (4,5) bisphosphate 5-phosphatas... INPPL1 0.040 inositol polyphosphate phosphatase-like 1 INPP5E 0.034 inositol polyphosphate-5-phosphatase E INPP5K 0.034 inositol polyphosphate-5-phosphatase K isoform 1 [Ho... INPP5K 0.031 inositol polyphosphate-5-phosphatase K isoform 2 [H... INPP5K 0.031 inositol polyphosphate-5-phosphatase K isoform 2 [Ho... PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B PRG4 0.022 proteoglycan 4 isoform A MUC2 0.022 mucin 2 precursor NACA 0.021 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.021 PREDICTED: hypothetical protein FLJ22184 RERE 0.021 atrophin-1 like protein isoform b RERE 0.021 atrophin-1 like protein isoform a RERE 0.021 atrophin-1 like protein isoform a PRB2 0.021 proline-rich protein BstNI subfamily 2 PTPN23 0.020 protein tyrosine phosphatase, non-receptor type 23 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.