BAT2 4792

Name: BAT2	Sequence: fasta or formatted (2157aa)		NCBI GI: 149158690
Description: HLA-B associated transcript-2		Referenced in: Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 159 3 C cysteine 0.4 8 1 D aspartate 4.1 89 2 E glutamate 6.9 149 4 F phenylalanine 2.1 46 1 G glycine 11.0 237 6 H histidine 1.3 29 2 I isoleucine 1.0 22 1 K lysine 4.5 97 2 L leucine 6.4 139 2 M methionine 1.1 24 2 N asparagine 1.6 35 1 P proline 19.3 416 5 Q glutamine 4.5 98 4 R arginine 8.3 179 4 S serine 9.7 210 3 T threonine 4.3 92 2 V valine 3.4 73 2 W tryptophan 0.9 20 1 Y tyrosine 1.6 35 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HLA-B associated transcript-2 BAT2L 0.152 HLA-B associated transcript 2-like BAT2D1 0.106 HBxAg transactivated protein 2 COL3A1 0.029 collagen type III alpha 1 preproprotein NACA 0.029 nascent polypeptide-associated complex alpha subuni... COL1A1 0.028 alpha 1 type I collagen preproprotein COL7A1 0.027 alpha 1 type VII collagen precursor COL2A1 0.026 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.026 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.026 alpha 1 type V collagen preproprotein COL4A5 0.025 type IV collagen alpha 5 isoform 1 precursor COL11A1 0.023 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.023 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.023 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A2 0.023 alpha 2 type V collagen preproprotein RAPH1 0.022 Ras association and pleckstrin homology domains 1 is... FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 COL11A2 0.022 collagen, type XI, alpha 2 isoform 2 preproprotein ... TTN 0.022 titin isoform N2-A PRG4 0.021 proteoglycan 4 isoform B PRG4 0.021 proteoglycan 4 isoform A FLJ22184 0.021 PREDICTED: hypothetical protein LOC80164 COL11A2 0.021 collagen, type XI, alpha 2 isoform 3 preproprotein ... PRG4 0.020 proteoglycan 4 isoform D PRG4 0.020 proteoglycan 4 isoform C COL11A2 0.020 collagen, type XI, alpha 2 isoform 1 preproprotein ... FLJ22184 0.020 PREDICTED: hypothetical protein FLJ22184 COL5A3 0.020 collagen, type V, alpha 3 preproprotein LMTK3 0.020 lemur tyrosine kinase 3 COL4A4 0.019 alpha 4 type IV collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.