BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4507753 tyrosinase precursor [Homo sapiens] (529 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4507753 tyrosinase precursor [Homo sapiens] 1124 0.0 gi|4507757 tyrosinase-related protein 1 precursor [Homo sapiens] 407 e-113 gi|6041667 dopachrome tautomerase isoform 1 [Homo sapiens] 397 e-110 gi|193788640 dopachrome tautomerase isoform 2 [Homo sapiens] 381 e-105 gi|61743978 stabilin 1 precursor [Homo sapiens] 42 0.001 gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 36 0.099 gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 36 0.099 gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 36 0.099 gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 35 0.17 gi|145553959 elaC homolog 2 [Homo sapiens] 35 0.22 gi|21264602 laminin alpha 5 [Homo sapiens] 33 0.49 gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] 33 0.84 gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 32 1.1 gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 32 1.1 gi|40807489 egf-like module containing, mucin-like, hormone rece... 32 1.1 gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 32 1.4 gi|61743980 stabilin 2 precursor [Homo sapiens] 32 1.4 gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 32 1.4 gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho... 32 1.9 gi|148612831 kinesin family member 18A [Homo sapiens] 31 2.5 gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 31 2.5 gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 31 2.5 gi|143770880 laminin, beta 4 [Homo sapiens] 31 3.2 gi|219842266 usherin isoform B [Homo sapiens] 30 4.2 gi|219842259 usherin isoform A [Homo sapiens] 30 4.2 gi|157384973 tenascin R [Homo sapiens] 30 4.2 gi|144226234 metastasis suppressor 1 [Homo sapiens] 30 4.2 gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 30 5.5 gi|16933525 unc5C [Homo sapiens] 30 5.5 gi|40217794 hypothetical protein LOC151050 [Homo sapiens] 30 5.5 >gi|4507753 tyrosinase precursor [Homo sapiens] Length = 529 Score = 1124 bits (2907), Expect = 0.0 Identities = 529/529 (100%), Positives = 529/529 (100%) Query: 1 MLLAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILL 60 MLLAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILL Sbjct: 1 MLLAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILL 60 Query: 61 SNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRLLVR 120 SNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRLLVR Sbjct: 61 SNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRLLVR 120 Query: 121 RNIFDLSAPEKDKFFAYLTLAKHTISSDYVIPIGTYGQMKNGSTPMFNDINIYDLFVWMH 180 RNIFDLSAPEKDKFFAYLTLAKHTISSDYVIPIGTYGQMKNGSTPMFNDINIYDLFVWMH Sbjct: 121 RNIFDLSAPEKDKFFAYLTLAKHTISSDYVIPIGTYGQMKNGSTPMFNDINIYDLFVWMH 180 Query: 181 YYVSMDALLGGSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPYWDWRD 240 YYVSMDALLGGSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPYWDWRD Sbjct: 181 YYVSMDALLGGSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPYWDWRD 240 Query: 241 AEKCDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPEGPLRRN 300 AEKCDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPEGPLRRN Sbjct: 241 AEKCDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPEGPLRRN 300 Query: 301 PGNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEGFASPLTGIADASQS 360 PGNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEGFASPLTGIADASQS Sbjct: 301 PGNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEGFASPLTGIADASQS 360 Query: 361 SMHNALHIYMNGTMSQVQGSANDPIFLLHHAFVDSIFEQWLRRHRPLQEVYPEANAPIGH 420 SMHNALHIYMNGTMSQVQGSANDPIFLLHHAFVDSIFEQWLRRHRPLQEVYPEANAPIGH Sbjct: 361 SMHNALHIYMNGTMSQVQGSANDPIFLLHHAFVDSIFEQWLRRHRPLQEVYPEANAPIGH 420 Query: 421 NRESYMVPFIPLYRNGDFFISSKDLGYDYSYLQDSDPDSFQDYIKSYLEQASRIWSWLLG 480 NRESYMVPFIPLYRNGDFFISSKDLGYDYSYLQDSDPDSFQDYIKSYLEQASRIWSWLLG Sbjct: 421 NRESYMVPFIPLYRNGDFFISSKDLGYDYSYLQDSDPDSFQDYIKSYLEQASRIWSWLLG 480 Query: 481 AAMVGAVLTALLAGLVSLLCRHKRKQLPEEKQPLLMEKEDYHSLYQSHL 529 AAMVGAVLTALLAGLVSLLCRHKRKQLPEEKQPLLMEKEDYHSLYQSHL Sbjct: 481 AAMVGAVLTALLAGLVSLLCRHKRKQLPEEKQPLLMEKEDYHSLYQSHL 529 >gi|4507757 tyrosinase-related protein 1 precursor [Homo sapiens] Length = 537 Score = 407 bits (1045), Expect = e-113 Identities = 220/538 (40%), Positives = 311/538 (57%), Gaps = 33/538 (6%) Query: 3 LAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSP----CGQLSGRGSCQNI 58 L ++ L FQ + FPR C + + L CCP S P CG SGRG C+ + Sbjct: 9 LGCIFFPLLLFQQARAQFPRQCATVEALRSGMCCPDLSPVSGPGTDRCGSSSGRGRCEAV 68 Query: 59 LLSNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRLL 118 + P PQ+P G DDRE WP F+NRTC C+GNF G NCG C+ G+ G C +R L+ Sbjct: 69 TADSRPHSPQYPHDGRDDREVWPLRFFNRTCHCNGNFSGHNCGTCRPGWRGAACDQRVLI 128 Query: 119 VRRNIFDLSAPEKDKFFAYLTLAKHTISSDYVIPIGTYGQM--KNGSTPMFNDINIYDLF 176 VRRN+ DLS EK+ F L +AK T +VI ++ +G+TP F +I+IY+ F Sbjct: 129 VRRNLLDLSKEEKNHFVRALDMAKRTTHPLFVIATRRSEEILGPDGNTPQFENISIYNYF 188 Query: 177 VWMHYYVSMDALLG-GSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPY 235 VW HYY LG G E + ++DF+HE PAFL WHR LLR E+++Q++ + +F++PY Sbjct: 189 VWTHYYSVKKTFLGVGQESFGEVDFSHEGPAFLTWHRYHLLRLEKDMQEMLQEPSFSLPY 248 Query: 236 WDWRDAEK-CDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPE 294 W++ + CDICTD+ MG + + L+SP S FS W++VC LE+Y++ +LCN T + Sbjct: 249 WNFATGKNVCDICTDDLMGSRSNFDSTLISPNSVFSQWRVVCDSLEDYDTLGTLCNSTED 308 Query: 295 GPLRRNP-GNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEGFASPLTG 353 GP+RRNP GN + RLP DV CL + +++ + SFRNT+EG++ P TG Sbjct: 309 GPIRRNPAGNVARPMVQRLPEPQDVAQCLEVGLFDTPPFYSNSTNSFRNTVEGYSDP-TG 367 Query: 354 IADASQSSMHNALHIYMNGTMSQVQGSANDPIFLLHHAFVDSIFEQWLRRHRPLQEVYPE 413 D + S+HN H+++NGT Q S NDPIF+L H F D++F++WLRR+ +P Sbjct: 368 KYDPAVRSLHNLAHLFLNGTGGQTHLSPNDPIFVLLHTFTDAVFDEWLRRYNADISTFPL 427 Query: 414 ANAPIGHNRESYMVPFIPLYRNGDFFISSKD-LGYDYSYLQDSDPDSFQDYIKSYLEQAS 472 NAPIGHNR+ MVPF P N + F+++ D LGY Y S S + Sbjct: 428 ENAPIGHNRQYNMVPFWPPVTNTEMFVTAPDNLGYTYEIQWPSREFSVPE---------- 477 Query: 473 RIWSWLLGAAMVGA-VLTALLAGLVSLLCRHKRKQLPEEKQPLLMEK-----EDYHSL 524 ++ A+VGA +L AL+ G S L R R+ + E QPLL ++ E+Y L Sbjct: 478 -----IIAIAVVGALLLVALIFGTASYLIR-ARRSMDEANQPLLTDQYQCYAEEYEKL 529 >gi|6041667 dopachrome tautomerase isoform 1 [Homo sapiens] Length = 519 Score = 397 bits (1019), Expect = e-110 Identities = 193/456 (42%), Positives = 280/456 (61%), Gaps = 15/456 (3%) Query: 2 LLAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSP-CGQLSGRGSCQNILL 60 LL+ L C + + G FPR C++ +L+ KECCP + + CG GRG C + Sbjct: 9 LLSCLGCKI--LPGAQGQFPRVCMTVDSLVNKECCPRLGAESANVCGSQQGRGQCTEVRA 66 Query: 61 SNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRL-LV 119 P + DDRE WP F++RTC+C+GNF G+NCG+CKFG+ GPNC ++ ++ Sbjct: 67 DTRPWSGPYILRNQDDRELWPRKFFHRTCKCTGNFAGYNCGDCKFGWTGPNCERKKPPVI 126 Query: 120 RRNIFDLSAPEKDKFFAYLTLAKHTISSDYVIP----IGTYGQMKNGSTPMFNDINIYDL 175 R+NI LS E+++F L LAK + DYVI +G G NG+ P F + ++YD Sbjct: 127 RQNIHSLSPQEREQFLGALDLAKKRVHPDYVITTQHWLGLLGP--NGTQPQFANCSVYDF 184 Query: 176 FVWMHYYVSMDALLGGSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPY 235 FVW+HYY D LLG +R IDF+H+ PAF+ WHR LL E+++Q+L G+E+F +PY Sbjct: 185 FVWLHYYSVRDTLLGPGRPYRAIDFSHQGPAFVTWHRYHLLCLERDLQRLIGNESFALPY 244 Query: 236 WDWRDAE-KCDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPE 294 W++ +CD+CTD+ G P +P L+S S FSSW+ VC L++YN +LCNGT E Sbjct: 245 WNFATGRNECDVCTDQLFGAARPDDPTLISRNSRFSSWETVCDSLDDYNHLVTLCNGTYE 304 Query: 295 GPLRRNPGNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEGFASPLTGI 354 G LRRN + + LP+ D+ CLSL ++++ + + FSFRN LEGF G Sbjct: 305 GLLRRNQMGRNSMK---LPTLKDIRDCLSLQKFDNPPFFQNSTFSFRNALEGF-DKADGT 360 Query: 355 ADASQSSMHNALHIYMNGTMSQVQGSANDPIFLLHHAFVDSIFEQWLRRHRPLQEVYPEA 414 D+ S+HN +H ++NGT + +ANDPIF++ H+F D+IF++W++R P + +P+ Sbjct: 361 LDSQVMSLHNLVHSFLNGTNALPHSAANDPIFVVLHSFTDAIFDEWMKRFNPPADAWPQE 420 Query: 415 NAPIGHNRESYMVPFIPLYRNGDFFISSKDLGYDYS 450 APIGHNR MVPF P N + F++S LGY Y+ Sbjct: 421 LAPIGHNRMYNMVPFFPPVTNEELFLTSDQLGYSYA 456 >gi|193788640 dopachrome tautomerase isoform 2 [Homo sapiens] Length = 552 Score = 381 bits (978), Expect = e-105 Identities = 194/489 (39%), Positives = 281/489 (57%), Gaps = 48/489 (9%) Query: 2 LLAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSP-CGQLSGRGSCQNILL 60 LL+ L C + + G FPR C++ +L+ KECCP + + CG GRG C + Sbjct: 9 LLSCLGCKI--LPGAQGQFPRVCMTVDSLVNKECCPRLGAESANVCGSQQGRGQCTEVRA 66 Query: 61 SNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRL-LV 119 P + DDRE WP F++RTC+C+GNF G+NCG+CKFG+ GPNC ++ ++ Sbjct: 67 DTRPWSGPYILRNQDDRELWPRKFFHRTCKCTGNFAGYNCGDCKFGWTGPNCERKKPPVI 126 Query: 120 RRNIFDLSAPEKDKFFAYLTLAKHTISSDYVIP----IGTYGQMKNGSTPMFNDINIYDL 175 R+NI LS E+++F L LAK + DYVI +G G NG+ P F + ++YD Sbjct: 127 RQNIHSLSPQEREQFLGALDLAKKRVHPDYVITTQHWLGLLGP--NGTQPQFANCSVYDF 184 Query: 176 FVWMHYYVSMDALLGGSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPY 235 FVW+HYY D LLG +R IDF+H+ PAF+ WHR LL E+++Q+L G+E+F +PY Sbjct: 185 FVWLHYYSVRDTLLGPGRPYRAIDFSHQGPAFVTWHRYHLLCLERDLQRLIGNESFALPY 244 Query: 236 WDWRDA-EKCDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPE 294 W++ +CD+CTD+ G P +P L+S S FSSW+ VC L++YN +LCNGT E Sbjct: 245 WNFATGRNECDVCTDQLFGAARPDDPTLISRNSRFSSWETVCDSLDDYNHLVTLCNGTYE 304 Query: 295 GPLRRNPGNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEGFASPLTGI 354 G LRRN + + +LP+ D+ CLSL ++++ + + FSFRN LEGF G Sbjct: 305 GLLRRNQMGRN---SMKLPTLKDIRDCLSLQKFDNPPFFQNSTFSFRNALEGF-DKADGT 360 Query: 355 ADASQSSMHNALHIYMNGTMSQVQGSANDPIF---------------------------- 386 D+ S+HN +H ++NGT + +ANDPIF Sbjct: 361 LDSQVMSLHNLVHSFLNGTNALPHSAANDPIFVVISNRLLYNATTNILEHVRKEKATKEL 420 Query: 387 -----LLHHAFVDSIFEQWLRRHRPLQEVYPEANAPIGHNRESYMVPFIPLYRNGDFFIS 441 L+ H+F D+IF++W++R P + +P+ APIGHNR MVPF P N + F++ Sbjct: 421 PSLHVLVLHSFTDAIFDEWMKRFNPPADAWPQELAPIGHNRMYNMVPFFPPVTNEELFLT 480 Query: 442 SKDLGYDYS 450 S LGY Y+ Sbjct: 481 SDQLGYSYA 489 >gi|61743978 stabilin 1 precursor [Homo sapiens] Length = 2570 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 32/102 (31%) Query: 20 FPRAC--VSSKNLMEKECCPPWSGDR-SPC-----GQLSGRGSCQNILLSNAPLGPQFPF 71 F R C +K + +CCP + G PC G SG G CQ+ L + Sbjct: 1303 FSRGCSYTCAKKIQVPDCCPGFFGTLCEPCPGGLGGVCSGHGQCQDRFLGSGE------- 1355 Query: 72 TGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCT 113 C C F G C C+ G +GPNCT Sbjct: 1356 -----------------CHCHEGFHGTACEVCELGRYGPNCT 1380 Score = 33.5 bits (75), Expect = 0.49 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 37/95 (38%) Query: 28 KNLMEKECCPPWSGDR---------SPCGQLSGRGSCQNILLSNAPLGPQFPFTGVDDRE 78 K +++K CCP + G R +PC +G G+C + G+D Sbjct: 93 KQVVQKACCPGYWGSRCHECPGGAETPC---NGHGTCLD---------------GMDR-- 132 Query: 79 SWPSVFYNRTCQCSGNFMGFNCGNCKF-GFWGPNC 112 N TC C NF G C C+ +GP+C Sbjct: 133 -------NGTCVCQENFRGSACQECQDPNRFGPDC 160 >gi|33598931 scavenger receptor class F, member 1 isoform 3 precursor [Homo sapiens] Length = 569 Score = 35.8 bits (81), Expect = 0.099 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 31/121 (25%) Query: 1 MLLAVLYCLLWSFQTSAGHFP----RACVSSKNLMEKECCPPWSGDRSPCGQ--LSGRGS 54 +LL +L LLW+ T CV+S E +CC W C G + Sbjct: 5 LLLPLL--LLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKDQECTIPICEGPDA 62 Query: 55 CQNILLSNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGN-CKFGFWGPNCT 113 CQ + P C+C F G +C + C +WGP+C Sbjct: 63 CQKDEVCVKP----------------------GLCRCKPGFFGAHCSSRCPGQYWGPDCR 100 Query: 114 E 114 E Sbjct: 101 E 101 >gi|33598929 scavenger receptor class F, member 1 isoform 1 precursor [Homo sapiens] Length = 830 Score = 35.8 bits (81), Expect = 0.099 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 31/121 (25%) Query: 1 MLLAVLYCLLWSFQTSAGHFP----RACVSSKNLMEKECCPPWSGDRSPCGQ--LSGRGS 54 +LL +L LLW+ T CV+S E +CC W C G + Sbjct: 5 LLLPLL--LLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKDQECTIPICEGPDA 62 Query: 55 CQNILLSNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGN-CKFGFWGPNCT 113 CQ + P C+C F G +C + C +WGP+C Sbjct: 63 CQKDEVCVKP----------------------GLCRCKPGFFGAHCSSRCPGQYWGPDCR 100 Query: 114 E 114 E Sbjct: 101 E 101 >gi|145309306 scavenger receptor class F, member 1 isoform 5 precursor [Homo sapiens] Length = 744 Score = 35.8 bits (81), Expect = 0.099 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 31/121 (25%) Query: 1 MLLAVLYCLLWSFQTSAGHFP----RACVSSKNLMEKECCPPWSGDRSPCGQ--LSGRGS 54 +LL +L LLW+ T CV+S E +CC W C G + Sbjct: 5 LLLPLL--LLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKDQECTIPICEGPDA 62 Query: 55 CQNILLSNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGN-CKFGFWGPNCT 113 CQ + P C+C F G +C + C +WGP+C Sbjct: 63 CQKDEVCVKP----------------------GLCRCKPGFFGAHCSSRCPGQYWGPDCR 100 Query: 114 E 114 E Sbjct: 101 E 101 >gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] Length = 1140 Score = 35.0 bits (79), Expect = 0.17 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 88 TCQCSGNFMGFNCGN-CKFGFWGPNCTER 115 TCQC + G NC + C WGP+CT R Sbjct: 123 TCQCEPGWGGTNCSSACDGDHWGPHCTSR 151 Score = 32.3 bits (72), Expect = 1.1 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Query: 86 NRTCQCSGNFMGFNCGN-CKFGFWGPNC 112 +R+CQC ++G +C C WGPNC Sbjct: 685 DRSCQCYPGWIGSDCSQPCPPAHWGPNC 712 Score = 30.0 bits (66), Expect = 5.5 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Query: 89 CQCSGNFMGFNCGN-CKFGFWGPNCT 113 C+C + G +C + C G WGPNC+ Sbjct: 557 CRCLPGWSGVHCDSVCAEGRWGPNCS 582 >gi|145553959 elaC homolog 2 [Homo sapiens] Length = 826 Score = 34.7 bits (78), Expect = 0.22 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Query: 371 NGTMSQVQGSANDPIFLLHH-----AFVDSIFEQWLRRHRP-LQEVYPEANAPIGHNRES 424 N T + QG A+ P+ L+ H VDS ++QW+ R P Q + N HN S Sbjct: 323 NATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMERFGPDTQHLVLNENCASVHNLRS 382 Query: 425 YMV 427 + + Sbjct: 383 HKI 385 >gi|21264602 laminin alpha 5 [Homo sapiens] Length = 3695 Score = 33.5 bits (75), Expect = 0.49 Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 89 CQCSGNFMGFNCGNCKFGFWGPNC 112 C C NF G +C C GF+GP C Sbjct: 515 CLCKPNFQGTHCELCAPGFYGPGC 538 Score = 32.3 bits (72), Expect = 1.1 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Query: 89 CQCSGNFMGFNCGNCKFGFWG-PNC 112 C C + +G +C C G+WG PNC Sbjct: 1457 CPCHAHVIGRDCSRCATGYWGFPNC 1481 Score = 30.0 bits (66), Expect = 5.5 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 15/57 (26%) Query: 53 GSCQNILLSNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWG 109 GSC L AP+ P P V C C + G +C CK GFWG Sbjct: 723 GSCHPAGL--APVDPALPEAQVP-------------CMCRAHVEGPSCDRCKPGFWG 764 >gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] Length = 1044 Score = 32.7 bits (73), Expect = 0.84 Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 22/84 (26%) Query: 34 ECCPPWSGDRSPCGQLSGRG----SCQNILLSNAPLGPQFPFTGVDDRESWPSVFYNRTC 89 EC P +SG + C Q+ G C L S A G P G +C Sbjct: 640 ECLPGFSG--ALCNQVCAGGYFGQDCAQ-LCSCANNGTCSPIDG--------------SC 682 Query: 90 QCSGNFMGFNCGN-CKFGFWGPNC 112 QC ++G +C C GFWGP C Sbjct: 683 QCFPGWIGKDCSQACPPGFWGPAC 706 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Query: 89 CQCSGNFMGFNCG-NCKFGFWGPNCT 113 C C+ FMG C +C G +GPNC+ Sbjct: 422 CTCAPGFMGEVCAVSCAAGTYGPNCS 447 Score = 29.3 bits (64), Expect = 9.3 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 88 TCQCSGNFMGFNCGN-CKFGFWGPNCTER 115 TC C + G +C + C WGP+C+ R Sbjct: 117 TCHCEPGWGGPDCSSGCDSDHWGPHCSNR 145 >gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo sapiens] Length = 870 Score = 32.3 bits (72), Expect = 1.1 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Query: 89 CQCSGNFMGFNCGN-CKFGFWGPNCTE 114 C+C + G NC C FWGP+C E Sbjct: 98 CRCRHGYFGANCDTKCPRQFWGPDCKE 124 Score = 30.0 bits (66), Expect = 5.5 Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 20/100 (20%) Query: 23 ACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTGVDDRESWPS 82 AC+ + C + + SPC Q SGR C+ + F DR + Sbjct: 199 ACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCR-----------ERTFGARCDR--YCQ 245 Query: 83 VFYNR------TCQCSGNFMGFNCGN-CKFGFWGPNCTER 115 F R TC C + G C C GF+G C R Sbjct: 246 CFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRR 285 >gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo sapiens] Length = 865 Score = 32.3 bits (72), Expect = 1.1 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Query: 89 CQCSGNFMGFNCGN-CKFGFWGPNCTE 114 C+C + G NC C FWGP+C E Sbjct: 98 CRCRHGYFGANCDTKCPRQFWGPDCKE 124 Score = 30.0 bits (66), Expect = 5.5 Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 20/100 (20%) Query: 23 ACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTGVDDRESWPS 82 AC+ + C + + SPC Q SGR C+ + F DR + Sbjct: 199 ACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCR-----------ERTFGARCDR--YCQ 245 Query: 83 VFYNR------TCQCSGNFMGFNCGN-CKFGFWGPNCTER 115 F R TC C + G C C GF+G C R Sbjct: 246 CFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRR 285 >gi|40807489 egf-like module containing, mucin-like, hormone receptor-like sequence 1 [Homo sapiens] Length = 886 Score = 32.3 bits (72), Expect = 1.1 Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 19 HFPRACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILLSNAPLG----PQFP--FT 72 HF V K++ E P G S C LSGR C + ++P G P P F+ Sbjct: 70 HFKDPGVRCKDIDECSQSPQPCGPNSSCKNLSGRYKCSCLDGFSSPTGNDWVPGKPGNFS 129 Query: 73 GVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCT 113 D E S C + ++C +C+ GF N T Sbjct: 130 CTDINECLTSSVCPEHSDCVNSMGSYSC-SCQVGFISRNST 169 >gi|122937343 platelet endothelial aggregation receptor 1 [Homo sapiens] Length = 1037 Score = 32.0 bits (71), Expect = 1.4 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Query: 89 CQCSGNFMGFNCG-NCKFGFWGPNCT 113 CQC +MG C +C G WG NC+ Sbjct: 552 CQCQAGWMGARCHLSCPEGLWGVNCS 577 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Query: 86 NRTCQCSGNFMGFNCGN-CKFGFWGPNCTE 114 N TC C + G +C C G WG NC + Sbjct: 634 NGTCYCLAGWTGPDCSQPCPPGHWGENCAQ 663 Score = 29.3 bits (64), Expect = 9.3 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%) Query: 89 CQCSGNFMGFNCGN-CKFGFWGPNC 112 CQC + G +C + C G WGP C Sbjct: 120 CQCVPGWRGDDCSSECAPGMWGPQC 144 Score = 29.3 bits (64), Expect = 9.3 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Query: 88 TCQCSGNFMGFNCG-NCKFGFWGPNCTE 114 +C C +MG C C GF GPNC++ Sbjct: 247 SCSCPPGWMGTICSLPCPEGFHGPNCSQ 274 >gi|61743980 stabilin 2 precursor [Homo sapiens] Length = 2551 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 20/88 (22%) Query: 28 KNLMEKECCPPWSGDR-SPCGQLSGRGSCQNILLSNAPLGPQFPFTGVDDRESWPSVFYN 86 + ++ +ECC + G + PC G+ QN+ N TGV Sbjct: 1329 RTVITRECCAGFFGPQCQPCP-----GNAQNVCFGNGICLDGVNGTGV------------ 1371 Query: 87 RTCQCSGNFMGFNCGNCKFGFWGPNCTE 114 C+C F G C C G +G +C + Sbjct: 1372 --CECGEGFSGTACETCTEGKYGIHCDQ 1397 Score = 29.6 bits (65), Expect = 7.1 Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 20/109 (18%) Query: 21 PRACVSSKNLMEKEC--CPPWSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTGVDDRE 78 PR C K ++C CP G +PC + RG C + + F G Sbjct: 1948 PRCC---KGYFGRDCQACP--GGPDAPC---NNRGVCLDQYSATGECKCNTGFNGTACEM 1999 Query: 79 SWPSVFYNRTC---------QCSGNFMGFNCGNCKFGFWGPNCTERRLL 118 WP F C QC G C+ G+ GP+C + +L Sbjct: 2000 CWPGRF-GPDCLPCGCSDHGQCDDGITGSGQCLCETGWTGPSCDTQAVL 2047 >gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] Length = 1541 Score = 32.0 bits (71), Expect = 1.4 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Query: 89 CQCSGNFMGFNCGN-CKFGFWGPNCT 113 C C+ + GF+C C G WGP+C+ Sbjct: 845 CSCAPGWTGFSCQRACDTGHWGPDCS 870 Score = 30.8 bits (68), Expect = 3.2 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Query: 89 CQCSGNFMGFNCG-NCKFGFWGPNCT 113 C+C F+G +C C G +GPNCT Sbjct: 1234 CRCPTGFLGTDCNLTCPQGRFGPNCT 1259 >gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo sapiens] Length = 365 Score = 31.6 bits (70), Expect = 1.9 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (14%) Query: 478 LLGAAMVGAVLTALLAGLVSLLCRHKRKQLPEEKQPLLMEKEDYHSL 524 L+ A++G +L L GL+ CR KR+ EEK EKE +H + Sbjct: 238 LIAGAIIGTLLALALIGLIIFCCRKKRR---EEK----YEKEVHHDI 277 >gi|148612831 kinesin family member 18A [Homo sapiens] Length = 898 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/55 (29%), Positives = 26/55 (47%) Query: 255 QHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPEGPLRRNPGNHDKSRT 309 Q+P+ L+ P+SF +S+Q + S + N + LC R+ G D T Sbjct: 715 QNPSTVTLMKPSSFTTSFQAISSNINSDNCLKMLCEVAIPHNRRKECGQEDLDST 769 >gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] Length = 3333 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%) Query: 89 CQCSGNFMGFNCGNCKFGFWG-PNCTERRLLVRRNIFDLSAPEKD 132 C C NF G NC C G++ P C +R IF +S P + Sbjct: 443 CHCKPNFHGDNCEKCAIGYYNFPFC------LRIPIFPVSTPSSE 481 >gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] Length = 3277 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%) Query: 89 CQCSGNFMGFNCGNCKFGFWG-PNCTERRLLVRRNIFDLSAPEKD 132 C C NF G NC C G++ P C +R IF +S P + Sbjct: 443 CHCKPNFHGDNCEKCAIGYYNFPFC------LRIPIFPVSTPSSE 481 >gi|143770880 laminin, beta 4 [Homo sapiens] Length = 1761 Score = 30.8 bits (68), Expect = 3.2 Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 19/92 (20%) Query: 34 ECCPPWSGDRSPCGQLSGRGSCQNIL---LSNAPLG-PQFPFTGVDDRES---------- 79 E C P +G CG + +C+ + N G P P DD S Sbjct: 870 ELCDPETGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYFAHSCYQ 929 Query: 80 --WPSVFYNRTCQCSGNFMGFNCGNCKFGFWG 109 W S + C C + G CG C GF+G Sbjct: 930 NLWSS---DVICNCLQGYTGTQCGECSTGFYG 958 Score = 29.3 bits (64), Expect = 9.3 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 12/108 (11%) Query: 8 CLLWSFQTSAGHFPRACVSSKNLMEKE----CCPPWSGDRSPCGQLSGRGSCQNILLSNA 63 CL +S +F +C +NL + C ++G + CG+ S G N +S A Sbjct: 911 CLCPDDPSSNQYFAHSCY--QNLWSSDVICNCLQGYTGTQ--CGECS-TGFYGNPRISGA 965 Query: 64 PLGPQFPFTGVD--DRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWG 109 P P +D D ES V +C N G NC CK G +G Sbjct: 966 PCQPCACNNNIDVTDPESCSRVT-GECLRCLHNTQGANCQLCKPGHYG 1012 >gi|219842266 usherin isoform B [Homo sapiens] Length = 5202 Score = 30.4 bits (67), Expect = 4.2 Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 89 CQCSGNFMGFNCGNCKFGF 107 C+C N +G C +C FGF Sbjct: 715 CKCKANVIGLRCDHCNFGF 733 >gi|219842259 usherin isoform A [Homo sapiens] Length = 1546 Score = 30.4 bits (67), Expect = 4.2 Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 89 CQCSGNFMGFNCGNCKFGF 107 C+C N +G C +C FGF Sbjct: 715 CKCKANVIGLRCDHCNFGF 733 >gi|157384973 tenascin R [Homo sapiens] Length = 1358 Score = 30.4 bits (67), Expect = 4.2 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 31/127 (24%) Query: 16 SAGHFPRACVSSKNLMEKECC--PPWSGDRSPCGQLSGRGSCQNI-LLSNAPLGPQFPFT 72 S + P C S ++ +C +SGD C +L C + L + + P+T Sbjct: 200 SEPYCPLGCSSRGVCVDGQCICDSEYSGD--DCSELRCPTDCSSRGLCVDGECVCEEPYT 257 Query: 73 GVDDRE-------SWPSVFYNRTCQCSGNFMGFNCGN-------------------CKFG 106 G D RE S N TC C ++G +CG C+ G Sbjct: 258 GEDCRELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCVCEEG 317 Query: 107 FWGPNCT 113 + GP+C+ Sbjct: 318 YQGPDCS 324 >gi|144226234 metastasis suppressor 1 [Homo sapiens] Length = 755 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 264 SPASFFSSWQIVCSRLEEYNSHQSLCNGTPEGPLRRNPGNHDKSRTPRLPSSADVEFCLS 323 SP++ S VCS L NS S +G+ +P +H + R+ L A V S Sbjct: 262 SPSTTMSRKSSVCSSLNSVNSSDSRSSGSHS----HSPSSHYRYRSSNLAQQAPVRLS-S 316 Query: 324 LTQYESGSMDKAA 336 ++ ++SG + + A Sbjct: 317 VSSHDSGFISQDA 329 >gi|145309326 laminin, gamma 1 precursor [Homo sapiens] Length = 1609 Score = 30.0 bits (66), Expect = 5.5 Identities = 11/20 (55%), Positives = 12/20 (60%) Query: 89 CQCSGNFMGFNCGNCKFGFW 108 C C N GFNC CK GF+ Sbjct: 463 CVCKDNVEGFNCERCKPGFF 482 >gi|16933525 unc5C [Homo sapiens] Length = 931 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Query: 217 RWEQEIQKLTGDENFTIPYWDWRDAEKCDICTD 249 +WE + + G+ENFT P + DAE C I T+ Sbjct: 632 QWEDVV--VVGEENFTTPCYIKLDAEACHILTE 662 >gi|40217794 hypothetical protein LOC151050 [Homo sapiens] Length = 987 Score = 30.0 bits (66), Expect = 5.5 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 440 ISSKDLGYDYSYLQDSDPDSFQDYI--KSYLEQASRIWSWLLGAAMVGAVLTALLAGLVS 497 +S + G D S D +Y K+ S W WL+ A VG+ T L A + Sbjct: 332 LSHVEEGLDSDATDSSSDDDLDEYTLRKNVAVNCSTEWKWLVDRARVGSRWTWLQAQISD 391 Query: 498 LLCR 501 L C+ Sbjct: 392 LECK 395 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.137 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,822,459 Number of Sequences: 37866 Number of extensions: 1099703 Number of successful extensions: 2730 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 2606 Number of HSP's gapped (non-prelim): 136 length of query: 529 length of database: 18,247,518 effective HSP length: 107 effective length of query: 422 effective length of database: 14,195,856 effective search space: 5990651232 effective search space used: 5990651232 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.