Guide to the Human Genome
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Name: TYR Sequence: fasta or formatted (529aa) NCBI GI: 4507753
Description:

tyrosinase precursor

Referenced in:

Skin and Related Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         30           2
 C cysteine            3.2         17           2
 D aspartate           5.7         30           2
 E glutamate           5.1         27           2
 F phenylalanine       5.9         31           2
 G glycine             6.4         34           2
 H histidine           3.2         17           2
 I isoleucine          4.2         22           1
 K lysine              3.2         17           1
 L leucine            10.4         55           2
 M methionine          2.8         15           1
 N asparagine          5.1         27           1
 P proline             6.2         33           2
 Q glutamine           4.3         23           1
 R arginine            5.1         27           2
 S serine              9.6         51           2
 T threonine           3.6         19           1
 V valine              3.2         17           1
 W tryptophan          2.6         14           1
 Y tyrosine            4.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tyrosinase precursor 
TYRP1                 0.348   tyrosinase-related protein 1 precursor 
DCT                   0.338   dopachrome tautomerase isoform 1 
DCT                   0.324   dopachrome tautomerase isoform 2 
STAB1                 0.015   stabilin 1 precursor 
SCARF1                0.010   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.010   scavenger receptor class F, member 1 isoform 1 precu...
SCARF1                0.010   scavenger receptor class F, member 1 isoform 5 prec...
MEGF10                0.009   multiple EGF-like-domains 10 
ELAC2                 0.009   elaC homolog 2 
LAMA5                 0.007   laminin alpha 5 
MEGF11                0.007   multiple EGF-like-domains 11 
SCARF2                0.006   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.006   scavenger receptor class F, member 2 isoform 2 [Homo...
EMR1                  0.006   egf-like module containing, mucin-like, hormone rece...
PEAR1                 0.006   platelet endothelial aggregation receptor 1 
STAB2                 0.006   stabilin 2 precursor 
MEGF6                 0.006   EGF-like-domain, multiple 3 
CXADR                 0.006   coxsackie virus and adenovirus receptor precursor [Ho...
KIF18A                0.005   kinesin family member 18A 
LAMA3                 0.005   laminin alpha 3 subunit isoform 1 
LAMA3                 0.005   laminin alpha 3 subunit isoform 3 
LAMB4                 0.005   laminin, beta 4 
USH2A                 0.005   usherin isoform B 
USH2A                 0.005   usherin isoform A 
TNR                   0.005   tenascin R 
MTSS1                 0.005   metastasis suppressor 1 
LAMC1                 0.005   laminin, gamma 1 precursor 
UNC5C                 0.005   unc5C 
C2orf67               0.005   hypothetical protein LOC151050 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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