Guide to the Human Genome
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Name: CXADR Sequence: fasta or formatted (365aa) NCBI GI: 4503173
Description:

coxsackie virus and adenovirus receptor precursor

Referenced in:

Adipose Tissue
Additional Genes in Development
Viral Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         22           2
 C cysteine            2.7         10           2
 D aspartate           5.5         20           2
 E glutamate           5.8         21           2
 F phenylalanine       1.9          7           1
 G glycine             6.3         23           1
 H histidine           1.4          5           2
 I isoleucine          6.6         24           2
 K lysine              7.7         28           2
 L leucine             9.0         33           3
 M methionine          2.2          8           1
 N asparagine          3.6         13           1
 P proline             6.8         25           3
 Q glutamine           3.6         13           1
 R arginine            3.8         14           2
 S serine             11.0         40           2
 T threonine           4.7         17           2
 V valine              6.8         25           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coxsackie virus and adenovirus receptor precursor [Ho... 
IGSF11                0.217   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.214   immunoglobulin superfamily, member 11 isoform a [Hom...
ASAM                  0.210   adipocyte-specific adhesion molecule 
VSIG8                 0.164   V-set and immunoglobulin domain containing 8 
GPA33                 0.158   transmembrane glycoprotein A33 precursor 
ESAM                  0.135   endothelial cell adhesion molecule 
VSIG2                 0.133   V-set and immunoglobulin domain containing 2 
VSIG1                 0.111   V-set and immunoglobulin domain containing 1 
F11R                  0.065   F11 receptor precursor 
JAM2                  0.063   junctional adhesion molecule 2 precursor 
MPZL1                 0.051   myelin protein zero-like 1 isoform b 
MPZL1                 0.051   myelin protein zero-like 1 isoform a 
HEPACAM               0.051   hepatocyte cell adhesion molecule 
LRIG1                 0.048   leucine-rich repeats and immunoglobulin-like domains...
TTN                   0.048   titin isoform N2-A 
CEACAM20              0.047   carcinoembryonic antigen-related cell adhesion mole...
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
PVRL2                 0.042   poliovirus receptor related 2 isoform delta precurs...
BTN1A1                0.042   butyrophilin, subfamily 1, member A1 
JAM3                  0.041   junctional adhesion molecule 3 precursor 
BTN3A1                0.041   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.041   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN3A1                0.041   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN2A1                0.041   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A1                0.041   butyrophilin, subfamily 2, member A1 isoform 2 precu...
VSIG4                 0.039   V-set and immunoglobulin domain containing 4 isoform ...
CEACAM20              0.039   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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