LAMC1 4077

Name: LAMC1	Sequence: fasta or formatted (1609aa)		NCBI GI: 145309326
Description: laminin, gamma 1 precursor		Referenced in: Netrins and Laminins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 139 6 C cysteine 6.2 100 1 D aspartate 6.6 106 2 E glutamate 8.4 135 2 F phenylalanine 3.0 49 2 G glycine 7.0 113 2 H histidine 1.7 27 1 I isoleucine 3.0 49 2 K lysine 5.0 81 2 L leucine 7.3 118 3 M methionine 1.4 22 3 N asparagine 6.2 100 2 P proline 4.4 71 2 Q glutamine 4.6 74 2 R arginine 6.0 96 2 S serine 6.2 99 2 T threonine 6.0 97 2 V valine 4.8 77 2 W tryptophan 0.7 11 2 Y tyrosine 2.8 45 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 laminin, gamma 1 precursor LAMC3 0.408 laminin, gamma 3 precursor LAMC2 0.205 laminin, gamma 2 isoform b precursor LAMC2 0.205 laminin, gamma 2 isoform a precursor LAMA1 0.179 laminin, alpha 1 precursor LAMA2 0.178 laminin alpha 2 subunit isoform b precursor LAMA2 0.178 laminin alpha 2 subunit isoform a precursor NTN1 0.125 netrin 1 LAMA5 0.113 laminin alpha 5 LAMB1 0.094 laminin, beta 1 precursor NTN3 0.091 netrin 3 LAMB4 0.086 laminin, beta 4 LAMB2 0.084 laminin, beta 2 precursor LAMA3 0.078 laminin alpha 3 subunit isoform 1 LAMA3 0.078 laminin alpha 3 subunit isoform 3 LAMB3 0.075 laminin, beta 3 precursor LAMB3 0.075 laminin, beta 3 precursor LAMB3 0.075 laminin, beta 3 precursor HSPG2 0.073 heparan sulfate proteoglycan 2 USH2A 0.066 usherin isoform B USH2A 0.066 usherin isoform A NTN4 0.066 netrin 4 NTNG1 0.060 netrin G1 isoform 1 NTNG2 0.055 netrin G2 LAMA4 0.040 laminin, alpha 4 isoform 1 precursor LAMA4 0.039 laminin, alpha 4 isoform 2 precursor LAMA4 0.039 laminin, alpha 4 isoform 2 precursor NTN5 0.037 netrin 5 NTNG1 0.036 netrin G1 isoform 3 NTNG1 0.034 netrin G1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.