Guide to the Human Genome
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Name: DCT Sequence: fasta or formatted (519aa) NCBI GI: 6041667
Description:

dopachrome tautomerase isoform 1

Referenced in:

Skin and Related Tissues

Other entries for this name:
alt prot [552aa] dopachrome tautomerase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         27           2
 C cysteine            3.7         19           2
 D aspartate           5.8         30           2
 E glutamate           4.2         22           2
 F phenylalanine       6.2         32           2
 G glycine             6.9         36           1
 H histidine           2.9         15           1
 I isoleucine          2.5         13           1
 K lysine              3.1         16           2
 L leucine            11.4         59           2
 M methionine          1.9         10           1
 N asparagine          5.4         28           1
 P proline             6.9         36           2
 Q glutamine           4.2         22           2
 R arginine            6.6         34           2
 S serine              6.0         31           2
 T threonine           6.0         31           2
 V valine              5.4         28           2
 W tryptophan          2.5         13           2
 Y tyrosine            3.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dopachrome tautomerase isoform 1 
DCT                   0.984   dopachrome tautomerase isoform 2 
TYRP1                 0.449   tyrosinase-related protein 1 precursor 
TYR                   0.343   tyrosinase precursor 
NAGPA                 0.010   N-acetylglucosamine-1-phosphodiester alpha-N-acetylg...
HSPG2                 0.009   heparan sulfate proteoglycan 2 
NOTCH2                0.007   notch 2 preproprotein 
TNC                   0.007   tenascin C precursor 
EYS                   0.007   eyes shut homolog isoform 1 
FST                   0.006   follistatin isoform FST317 precursor 
FST                   0.006   follistatin isoform FST344 precursor 
LAMB1                 0.006   laminin, beta 1 precursor 
MEGF6                 0.006   EGF-like-domain, multiple 3 
KRT79                 0.006   keratin 6L 
NTN1                  0.006   netrin 1 
CRB1                  0.006   crumbs homolog 1 precursor 
IL3RA                 0.006   interleukin 3 receptor, alpha precursor 
LAMA2                 0.006   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.006   laminin alpha 2 subunit isoform a precursor 
ITGBL1                0.006   integrin, beta-like 1 (with EGF-like repeat domains) ...
DNER                  0.006   delta-notch-like EGF repeat-containing transmembran...
LAMA5                 0.005   laminin alpha 5 
MUC1                  0.005   mucin 1 isoform 5 precursor 
NOTCH1                0.005   notch1 preproprotein 
SLIT2                 0.005   slit homolog 2 
NTN4                  0.005   netrin 4 
NTN3                  0.005   netrin 3 
PEAR1                 0.005   platelet endothelial aggregation receptor 1 
ABCA5                 0.005   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.005   ATP-binding cassette, sub-family A , member 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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