TNR 6147

Name: TNR	Sequence: fasta or formatted (1358aa)		NCBI GI: 157384973
Description: tenascin R		Referenced in: Fibronectin Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 78 2 C cysteine 3.0 41 2 D aspartate 5.3 72 2 E glutamate 7.8 106 4 F phenylalanine 2.9 39 2 G glycine 7.6 103 3 H histidine 1.8 25 1 I isoleucine 4.9 67 2 K lysine 2.4 33 2 L leucine 7.4 101 2 M methionine 1.6 22 2 N asparagine 4.1 56 2 P proline 5.2 71 2 Q glutamine 4.3 58 2 R arginine 5.2 71 2 S serine 9.2 125 3 T threonine 8.2 112 2 V valine 8.0 108 2 W tryptophan 1.5 21 2 Y tyrosine 3.6 49 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tenascin R TNN 0.298 tenascin N TNC 0.226 tenascin C precursor TNXB 0.185 tenascin XB isoform 1 precursor TNXB 0.161 tenascin XB isoform 2 FN1 0.120 fibronectin 1 isoform 5 preproprotein FN1 0.120 fibronectin 1 isoform 6 preproprotein FN1 0.119 fibronectin 1 isoform 3 preproprotein FN1 0.119 fibronectin 1 isoform 4 preproprotein FN1 0.111 fibronectin 1 isoform 1 preproprotein FN1 0.111 fibronectin 1 isoform 2 preproprotein FIBCD1 0.070 fibrinogen C domain containing 1 FIBCD1 0.070 fibrinogen C domain containing 1 FCN2 0.068 ficolin 2 isoform b precursor FCN2 0.068 ficolin 2 isoform a precursor COL12A1 0.067 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.067 collagen, type XII, alpha 1 long isoform precursor [... FCN3 0.066 ficolin 3 isoform 2 precursor FCN3 0.066 ficolin 3 isoform 1 precursor FCN1 0.065 ficolin 1 precursor MFAP4 0.062 microfibrillar-associated protein 4 ANGPTL2 0.060 angiopoietin-like 2 precursor ANGPTL1 0.059 angiopoietin-like 1 precursor ANGPTL6 0.058 angiopoietin-like 6 ANGPTL7 0.058 angiopoietin-like 7 COL14A1 0.055 collagen, type XIV, alpha 1 FGL1 0.054 fibrinogen-like 1 precursor FGL1 0.054 fibrinogen-like 1 precursor FGL1 0.054 fibrinogen-like 1 precursor FGL1 0.054 fibrinogen-like 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.