Guide to the Human Genome
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Name: C2orf67 Sequence: fasta or formatted (987aa) NCBI GI: 40217794
Description:

hypothetical protein LOC151050

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         49           3
 C cysteine            1.9         19           1
 D aspartate           4.4         43           3
 E glutamate           7.5         74           3
 F phenylalanine       2.9         29           1
 G glycine             3.3         33           1
 H histidine           3.2         32           2
 I isoleucine          3.9         38           2
 K lysine              8.4         83           3
 L leucine            11.0        109           3
 M methionine          1.9         19           1
 N asparagine          5.3         52           2
 P proline             4.9         48           2
 Q glutamine           5.9         58           2
 R arginine            4.7         46           3
 S serine             12.0        118           5
 T threonine           5.9         58           2
 V valine              4.2         41           2
 W tryptophan          1.6         16           2
 Y tyrosine            2.2         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC151050 
KIAA1267              0.107   hypothetical protein LOC284058 
LOC100294337          0.011   PREDICTED: hypothetical protein XP_002344104 isofor...
LOC100294337          0.011   PREDICTED: hypothetical protein XP_002344105 isofor...
LOC100294337          0.011   PREDICTED: hypothetical protein XP_002344106 isofor...
MSL1                  0.007   hampin 
CENPF                 0.006   centromere protein F 
MYH7                  0.006   myosin, heavy chain 7, cardiac muscle, beta 
DST                   0.005   dystonin isoform 1e precursor 
C9orf84               0.005   hypothetical protein LOC158401 isoform 2 
C9orf84               0.005   hypothetical protein LOC158401 isoform 1 
MUC3A                 0.005   PREDICTED: mucin 3A, intestinal 
IPCEF1                0.005   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.005   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.005   phosphoinositide-binding protein PIP3-E isoform 2 [H...
FLJ32682              0.005   hypothetical protein LOC220081 
C4orf31               0.005   hypothetical protein LOC79625 
CCDC63                0.005   coiled-coil domain containing 63 
ATXN7                 0.004   ataxin 7 isoform b 
ATXN7                 0.004   ataxin 7 isoform a 
CCNT2                 0.004   cyclin T2 isoform b 
RRBP1                 0.004   ribosome binding protein 1 
RRBP1                 0.004   ribosome binding protein 1 
CEP110                0.004   centrosomal protein 110kDa 
SLMAP                 0.004   sarcolemma associated protein 
FAM188B               0.004   hypothetical protein LOC84182 
SRGAP1                0.004   SLIT-ROBO Rho GTPase activating protein 1 
SOCS6                 0.004   suppressor of cytokine signaling 6 
OBSCN                 0.003   obscurin, cytoskeletal calmodulin and titin-interac...
SPG11                 0.003   spatacsin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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