Guide to the Human Genome
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Name: MTSS1 Sequence: fasta or formatted (755aa) NCBI GI: 144226234
Description:

metastasis suppressor 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         53           4
 C cysteine            1.3         10           2
 D aspartate           5.3         40           1
 E glutamate           6.6         50           3
 F phenylalanine       2.1         16           1
 G glycine             6.1         46           3
 H histidine           2.0         15           1
 I isoleucine          4.2         32           2
 K lysine              5.4         41           3
 L leucine             7.0         53           3
 M methionine          2.5         19           1
 N asparagine          2.1         16           1
 P proline             9.7         73           2
 Q glutamine           5.6         42           2
 R arginine            6.0         45           2
 S serine             13.4        101           3
 T threonine           6.4         48           3
 V valine              4.4         33           2
 W tryptophan          0.8          6           1
 Y tyrosine            2.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metastasis suppressor 1 
MTSS1L                0.500   metastasis suppressor 1-like 
BAIAP2                0.030   BAI1-associated protein 2 isoform 4 
BAIAP2                0.030   BAI1-associated protein 2 isoform 3 
BAIAP2                0.030   BAI1-associated protein 2 isoform 1 
BAIAP2                0.030   BAI1-associated protein 2 isoform 2 
BAIAP2L1              0.021   BAI1-associated protein 2-like 1 
MUC12                 0.021   PREDICTED: mucin 12 
MUC12                 0.021   PREDICTED: mucin 12, cell surface associated 
FLJ22184              0.019   PREDICTED: hypothetical protein LOC80164 
MLL3                  0.018   myeloid/lymphoid or mixed-lineage leukemia 3 
NHSL1                 0.018   NHS-like 1 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
PRG4                  0.016   proteoglycan 4 isoform D 
PRG4                  0.016   proteoglycan 4 isoform C 
PRG4                  0.016   proteoglycan 4 isoform B 
PRG4                  0.016   proteoglycan 4 isoform A 
ATN1                  0.016   atrophin-1 
ATN1                  0.016   atrophin-1 
LOC100130716          0.016   PREDICTED: similar to mucin 11 
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform a ...
ZAN                   0.016   zonadhesin isoform 3 
ZAN                   0.016   zonadhesin isoform 6 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
TCOF1                 0.015   Treacher Collins-Franceschetti syndrome 1 isoform c ...
EP300                 0.015   E1A binding protein p300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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