Guide to the Human Genome
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Name: ELAC2 Sequence: fasta or formatted (826aa) NCBI GI: 145553959
Description:

elaC homolog 2

Referenced in:

Prostate
RNases and RNA Stability
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         65           2
 C cysteine            2.7         22           1
 D aspartate           3.4         28           1
 E glutamate           7.9         65           3
 F phenylalanine       3.4         28           1
 G glycine             6.4         53           2
 H histidine           3.9         32           2
 I isoleucine          4.5         37           2
 K lysine              4.7         39           2
 L leucine            10.8         89           3
 M methionine          2.4         20           1
 N asparagine          2.7         22           1
 P proline             6.7         55           2
 Q glutamine           5.4         45           2
 R arginine            7.0         58           2
 S serine              6.9         57           2
 T threonine           4.2         35           2
 V valine              6.5         54           3
 W tryptophan          0.8          7           1
 Y tyrosine            1.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elaC homolog 2 
ELAC1                 0.021   elaC homolog 1 
TYR                   0.006   tyrosinase precursor 
POF1B                 0.005   premature ovarian failure, 1B 
AKAP13                0.005   A-kinase anchor protein 13 isoform 1 
AKAP13                0.005   A-kinase anchor protein 13 isoform 2 
PLEC1                 0.005   plectin 1 isoform 11 
PLEC1                 0.005   plectin 1 isoform 10 
PLEC1                 0.005   plectin 1 isoform 8 
PLEC1                 0.005   plectin 1 isoform 7 
PLEC1                 0.005   plectin 1 isoform 6 
PLEC1                 0.005   plectin 1 isoform 3 
PLEC1                 0.005   plectin 1 isoform 2 
PLEC1                 0.005   plectin 1 isoform 1 
CPSF3L                0.005   cleavage and polyadenylation specific factor 3-like ...
ETV5                  0.004   ets variant gene 5 (ets-related molecule) 
TTN                   0.004   titin isoform N2-A 
TTN                   0.004   titin isoform novex-2 
TTN                   0.004   titin isoform novex-1 
TTN                   0.004   titin isoform N2-B 
CENPE                 0.004   centromere protein E 
HFM1                  0.004   HFM1 protein 
TBC1D4                0.004   TBC1 domain family, member 4 
PCDHAC1               0.004   protocadherin alpha subfamily C, 1 isoform 1 precurs...
PCDHAC1               0.004   protocadherin alpha subfamily C, 1 isoform 2 precurs...
LOC100290372          0.003   PREDICTED: hypothetical protein XP_002346788 
LOC100288606          0.003   PREDICTED: hypothetical protein XP_002342652 
KIF16B                0.003   kinesin-like motor protein C20orf23 
SLC36A2               0.003   solute carrier family 36, member 2 
TRH                   0.003   thyrotropin-releasing hormone 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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