Guide to the Human Genome
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Name: KIF18A Sequence: fasta or formatted (898aa) NCBI GI: 148612831
Description:

kinesin family member 18A

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         46           2
 C cysteine            2.3         21           2
 D aspartate           4.5         40           2
 E glutamate           7.5         67           3
 F phenylalanine       3.0         27           2
 G glycine             3.6         32           2
 H histidine           3.6         32           2
 I isoleucine          4.6         41           1
 K lysine              9.6         86           2
 L leucine             9.8         88           3
 M methionine          3.0         27           2
 N asparagine          6.5         58           2
 P proline             4.0         36           2
 Q glutamine           5.7         51           3
 R arginine            5.0         45           2
 S serine              8.1         73           3
 T threonine           6.1         55           2
 V valine              5.8         52           3
 W tryptophan          0.2          2           1
 Y tyrosine            2.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 18A 
KIF18B                0.249   kinesin family member 18B 
KIF19                 0.171   kinesin family member 19 
KIF3B                 0.135   kinesin family member 3B 
KIF3A                 0.133   kinesin family member 3A 
KIF1B                 0.122   kinesin family member 1B isoform alpha 
KIF1B                 0.122   kinesin family member 1B isoform b 
KIF4A                 0.122   kinesin family member 4 
KIF13B                0.121   kinesin family member 13B 
KIF4B                 0.121   kinesin family member 4B 
KIF3C                 0.121   kinesin family member 3C 
KIF27                 0.120   kinesin family member 27 
KIF1A                 0.118   axonal transport of synaptic vesicles 
KIF16B                0.118   kinesin-like motor protein C20orf23 
KIF21B                0.118   kinesin family member 21B 
KIF13A                0.118   kinesin family member 13A isoform d 
KIF13A                0.118   kinesin family member 13A isoform c 
KIF13A                0.118   kinesin family member 13A isoform b 
KIF13A                0.118   kinesin family member 13A isoform a 
KIF17                 0.118   kinesin family member 17 isoform b 
KIF17                 0.118   kinesin family member 17 isoform a 
KIF7                  0.117   kinesin family member 7 
KIF21A                0.116   kinesin family member 21A 
KIF11                 0.116   kinesin family member 11 
KIF1C                 0.114   kinesin family member 1C 
CENPE                 0.111   centromere protein E 
KIF5C                 0.111   kinesin family member 5C 
KIF15                 0.110   kinesin family member 15 
KIF5A                 0.109   kinesin family member 5A 
KIF5B                 0.108   kinesin family member 5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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