Guide to the Human Genome
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Name: MPP1 Sequence: fasta or formatted (466aa) NCBI GI: 4505237
Description:

palmitoylated membrane protein 1

Referenced in:

PDZ Domain
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         29           1
 C cysteine            0.9          4           1
 D aspartate           4.3         20           2
 E glutamate           7.7         36           2
 F phenylalanine       3.6         17           1
 G glycine             6.0         28           2
 H histidine           2.8         13           1
 I isoleucine          5.8         27           2
 K lysine              7.9         37           4
 L leucine             8.2         38           2
 M methionine          2.6         12           1
 N asparagine          3.9         18           2
 P proline             5.6         26           2
 Q glutamine           6.7         31           2
 R arginine            3.9         18           1
 S serine              8.6         40           2
 T threonine           5.4         25           2
 V valine              6.2         29           2
 W tryptophan          1.1          5           2
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   palmitoylated membrane protein 1 
CASK                  0.559   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.542   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.534   calcium/calmodulin-dependent serine protein kinase ...
MPP6                  0.365   membrane protein, palmitoylated 6 
MPP2                  0.355   palmitoylated membrane protein 2 
MPP7                  0.285   palmitoylated membrane protein 7 
MPP5                  0.273   membrane protein, palmitoylated 5 
MPP3                  0.254   palmitoylated membrane protein 3 
DLG3                  0.151   synapse-associated protein 102 isoform a 
DLG3                  0.147   synapse-associated protein 102 isoform b 
DLG2                  0.144   chapsyn-110 isoform 1 
DLG2                  0.144   chapsyn-110 isoform 2 
DLG2                  0.141   chapsyn-110 isoform 3 
DLG4                  0.138   post-synaptic density protein 95 isoform 1 
DLG4                  0.138   post-synaptic density protein 95 isoform 2 
DLG1                  0.136   discs, large homolog 1 isoform 1 
MPP4                  0.134   membrane protein, palmitoylated 4 
DLG1                  0.133   discs, large homolog 1 isoform 2 
DLG2                  0.128   chapsyn-110 isoform 4 
GUK1                  0.090   guanylate kinase 1 isoform b 
GUK1                  0.090   guanylate kinase 1 isoform a 
GUK1                  0.090   guanylate kinase 1 isoform b 
LRGUK                 0.035   leucine-rich repeats and guanylate kinase domain con...
DLG5                  0.035   discs large homolog 5 
TJP1                  0.032   tight junction protein 1 isoform b 
TJP1                  0.032   tight junction protein 1 isoform a 
GRIP2                 0.028   glutamate receptor interacting protein 2 
MAGI1                 0.026   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.026   membrane associated guanylate kinase, WW and PDZ dom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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