Guide to the Human Genome
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Name: CASK Sequence: fasta or formatted (897aa) NCBI GI: 186700629
Description:

calcium/calmodulin-dependent serine protein kinase isoform 3

Referenced in:

Ankyrin Family
Calmodulin and Calcium
PDZ Domain

Other entries for this name:
alt prot [898aa] calcium/calmodulin-dependent serine protein kinase isoform 2
alt prot [921aa] calcium/calmodulin-dependent serine protein kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         56           2
 C cysteine            1.8         16           1
 D aspartate           6.1         55           3
 E glutamate           8.0         72           2
 F phenylalanine       3.7         33           1
 G glycine             5.5         49           2
 H histidine           3.8         34           1
 I isoleucine          6.1         55           2
 K lysine              6.6         59           4
 L leucine             8.8         79           2
 M methionine          2.6         23           2
 N asparagine          3.6         32           2
 P proline             5.4         48           3
 Q glutamine           4.3         39           2
 R arginine            5.2         47           2
 S serine              5.7         51           3
 T threonine           4.8         43           2
 V valine              7.2         65           2
 W tryptophan          1.0          9           2
 Y tyrosine            3.6         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent serine protein kinase ... 
CASK                  0.988   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.981   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.282   palmitoylated membrane protein 1 
MPP2                  0.218   palmitoylated membrane protein 2 
MPP6                  0.217   membrane protein, palmitoylated 6 
MPP7                  0.167   palmitoylated membrane protein 7 
MPP5                  0.157   membrane protein, palmitoylated 5 
MPP3                  0.154   palmitoylated membrane protein 3 
CAMK2D                0.145   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.145   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.145   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.145   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.145   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.145   calcium/calmodulin-dependent protein kinase II delta...
CAMK2A                0.140   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.140   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.139   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.139   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.139   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.139   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.139   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.139   calcium/calmodulin-dependent protein kinase II gamma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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