Guide to the Human Genome
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Name: MPP5 Sequence: fasta or formatted (675aa) NCBI GI: 38570142
Description:

membrane protein, palmitoylated 5

Referenced in:

PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         38           2
 C cysteine            0.7          5           1
 D aspartate           6.4         43           2
 E glutamate           9.8         66           3
 F phenylalanine       2.5         17           1
 G glycine             4.9         33           2
 H histidine           3.4         23           2
 I isoleucine          6.8         46           2
 K lysine              7.6         51           3
 L leucine             9.3         63           3
 M methionine          2.4         16           2
 N asparagine          4.7         32           2
 P proline             5.3         36           3
 Q glutamine           6.4         43           3
 R arginine            5.9         40           4
 S serine              5.8         39           2
 T threonine           4.1         28           2
 V valine              5.3         36           1
 W tryptophan          0.7          5           2
 Y tyrosine            2.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane protein, palmitoylated 5 
MPP7                  0.280   palmitoylated membrane protein 7 
MPP3                  0.250   palmitoylated membrane protein 3 
MPP6                  0.243   membrane protein, palmitoylated 6 
MPP2                  0.237   palmitoylated membrane protein 2 
MPP4                  0.213   membrane protein, palmitoylated 4 
CASK                  0.213   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.209   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.203   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.187   palmitoylated membrane protein 1 
DLG2                  0.142   chapsyn-110 isoform 1 
DLG2                  0.142   chapsyn-110 isoform 2 
DLG2                  0.137   chapsyn-110 isoform 3 
DLG1                  0.136   discs, large homolog 1 isoform 1 
DLG1                  0.133   discs, large homolog 1 isoform 2 
DLG3                  0.133   synapse-associated protein 102 isoform b 
DLG3                  0.132   synapse-associated protein 102 isoform a 
DLG4                  0.124   post-synaptic density protein 95 isoform 1 
DLG4                  0.124   post-synaptic density protein 95 isoform 2 
DLG2                  0.120   chapsyn-110 isoform 4 
GUK1                  0.078   guanylate kinase 1 isoform b 
GUK1                  0.078   guanylate kinase 1 isoform a 
GUK1                  0.078   guanylate kinase 1 isoform b 
LRGUK                 0.050   leucine-rich repeats and guanylate kinase domain con...
DLG5                  0.045   discs large homolog 5 
TJP1                  0.043   tight junction protein 1 isoform b 
TJP1                  0.043   tight junction protein 1 isoform a 
TJP3                  0.043   tight junction protein 3 
TJP2                  0.035   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.035   tight junction protein 2 (zona occludens 2) isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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