Guide to the Human Genome
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Name: GUK1 Sequence: fasta or formatted (197aa) NCBI GI: 226874833
Description:

guanylate kinase 1 isoform b

Referenced in:

Nucleotide Pathways
PDZ Domain

Other entries for this name:
alt prot [218aa] guanylate kinase 1 isoform a
alt mRNA [197aa] guanylate kinase 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         17           3
 C cysteine            0.5          1           1
 D aspartate           5.1         10           1
 E glutamate           8.1         16           2
 F phenylalanine       3.0          6           1
 G glycine             7.1         14           1
 H histidine           2.0          4           1
 I isoleucine          5.1         10           2
 K lysine              5.1         10           2
 L leucine             9.1         18           2
 M methionine          2.0          4           1
 N asparagine          3.6          7           1
 P proline             4.6          9           2
 Q glutamine           5.6         11           1
 R arginine            7.1         14           1
 S serine              8.1         16           2
 T threonine           4.6          9           2
 V valine              8.1         16           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.5          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanylate kinase 1 isoform b 
GUK1                  1.000   guanylate kinase 1 isoform a 
GUK1                  1.000   guanylate kinase 1 isoform b 
MPP5                  0.289   membrane protein, palmitoylated 5 
MPP7                  0.247   palmitoylated membrane protein 7 
MPP4                  0.233   membrane protein, palmitoylated 4 
MPP2                  0.233   palmitoylated membrane protein 2 
MPP3                  0.231   palmitoylated membrane protein 3 
MPP6                  0.228   membrane protein, palmitoylated 6 
MPP1                  0.228   palmitoylated membrane protein 1 
DLG3                  0.214   synapse-associated protein 102 isoform b 
DLG3                  0.214   synapse-associated protein 102 isoform a 
DLG4                  0.211   post-synaptic density protein 95 isoform 1 
DLG4                  0.211   post-synaptic density protein 95 isoform 2 
DLG1                  0.203   discs, large homolog 1 isoform 1 
DLG1                  0.203   discs, large homolog 1 isoform 2 
CASK                  0.200   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.200   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.200   calcium/calmodulin-dependent serine protein kinase ...
DLG2                  0.194   chapsyn-110 isoform 3 
DLG2                  0.194   chapsyn-110 isoform 1 
DLG2                  0.194   chapsyn-110 isoform 2 
DLG2                  0.194   chapsyn-110 isoform 4 
LRGUK                 0.186   leucine-rich repeats and guanylate kinase domain con...
CARD14                0.056   caspase recruitment domain protein 14 isoform 1 [Hom...
MAGI1                 0.047   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.047   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.047   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.044   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.044   membrane-associated guanylate kinase-related  3 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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