Guide to the Human Genome
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Name: DLG2 Sequence: fasta or formatted (334aa) NCBI GI: 218156270
Description:

chapsyn-110 isoform 4

Referenced in:

PDZ Domain
Synapses

Other entries for this name:
alt prot [975aa] chapsyn-110 isoform 1
alt prot [749aa] chapsyn-110 isoform 3
alt prot [870aa] chapsyn-110 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         13           1
 C cysteine            0.9          3           1
 D aspartate           7.5         25           2
 E glutamate           8.1         27           2
 F phenylalanine       3.6         12           1
 G glycine             7.2         24           1
 H histidine           1.8          6           1
 I isoleucine          7.5         25           2
 K lysine              7.8         26           2
 L leucine             7.2         24           1
 M methionine          3.0         10           2
 N asparagine          3.3         11           1
 P proline             4.5         15           1
 Q glutamine           4.8         16           1
 R arginine            7.2         24           2
 S serine              7.2         24           2
 T threonine           3.9         13           2
 V valine              5.7         19           1
 W tryptophan          0.9          3           2
 Y tyrosine            4.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chapsyn-110 isoform 4 
DLG2                  1.000   chapsyn-110 isoform 3 
DLG2                  0.926   chapsyn-110 isoform 1 
DLG2                  0.926   chapsyn-110 isoform 2 
DLG3                  0.811   synapse-associated protein 102 isoform a 
DLG1                  0.802   discs, large homolog 1 isoform 1 
DLG1                  0.779   discs, large homolog 1 isoform 2 
DLG3                  0.754   synapse-associated protein 102 isoform b 
DLG4                  0.648   post-synaptic density protein 95 isoform 1 
DLG4                  0.648   post-synaptic density protein 95 isoform 2 
MPP5                  0.244   membrane protein, palmitoylated 5 
MPP2                  0.217   palmitoylated membrane protein 2 
MPP3                  0.215   palmitoylated membrane protein 3 
MPP7                  0.215   palmitoylated membrane protein 7 
MPP6                  0.204   membrane protein, palmitoylated 6 
MPP1                  0.178   palmitoylated membrane protein 1 
CASK                  0.177   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.177   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.172   calcium/calmodulin-dependent serine protein kinase ...
DLG5                  0.160   discs large homolog 5 
MPP4                  0.149   membrane protein, palmitoylated 4 
TJP3                  0.115   tight junction protein 3 
TJP1                  0.112   tight junction protein 1 isoform b 
TJP1                  0.112   tight junction protein 1 isoform a 
GUK1                  0.108   guanylate kinase 1 isoform b 
GUK1                  0.108   guanylate kinase 1 isoform a 
GUK1                  0.108   guanylate kinase 1 isoform b 
TJP2                  0.101   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.101   tight junction protein 2 (zona occludens 2) isoform ...
LRGUK                 0.057   leucine-rich repeats and guanylate kinase domain con...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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