Guide to the Human Genome
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Name: MPP2 Sequence: fasta or formatted (552aa) NCBI GI: 52630447
Description:

palmitoylated membrane protein 2

Referenced in:

PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         43           2
 C cysteine            1.1          6           1
 D aspartate           4.7         26           2
 E glutamate           8.5         47           2
 F phenylalanine       2.9         16           1
 G glycine             7.2         40           2
 H histidine           2.5         14           1
 I isoleucine          4.2         23           2
 K lysine              4.3         24           4
 L leucine            10.9         60           2
 M methionine          2.2         12           2
 N asparagine          3.3         18           2
 P proline             5.6         31           3
 Q glutamine           4.3         24           2
 R arginine            7.6         42           2
 S serine              6.2         34           2
 T threonine           5.1         28           2
 V valine              8.0         44           2
 W tryptophan          0.9          5           2
 Y tyrosine            2.7         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   palmitoylated membrane protein 2 
MPP6                  0.701   membrane protein, palmitoylated 6 
CASK                  0.365   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.357   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.350   calcium/calmodulin-dependent serine protein kinase ...
MPP7                  0.305   palmitoylated membrane protein 7 
MPP1                  0.300   palmitoylated membrane protein 1 
MPP5                  0.293   membrane protein, palmitoylated 5 
MPP3                  0.252   palmitoylated membrane protein 3 
DLG2                  0.142   chapsyn-110 isoform 1 
DLG2                  0.142   chapsyn-110 isoform 2 
DLG2                  0.137   chapsyn-110 isoform 3 
DLG3                  0.136   synapse-associated protein 102 isoform a 
DLG3                  0.131   synapse-associated protein 102 isoform b 
DLG2                  0.131   chapsyn-110 isoform 4 
DLG1                  0.130   discs, large homolog 1 isoform 1 
DLG1                  0.127   discs, large homolog 1 isoform 2 
MPP4                  0.118   membrane protein, palmitoylated 4 
DLG4                  0.114   post-synaptic density protein 95 isoform 1 
DLG4                  0.114   post-synaptic density protein 95 isoform 2 
GUK1                  0.078   guanylate kinase 1 isoform b 
GUK1                  0.078   guanylate kinase 1 isoform a 
GUK1                  0.078   guanylate kinase 1 isoform b 
TJP3                  0.032   tight junction protein 3 
TJP2                  0.026   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.026   tight junction protein 2 (zona occludens 2) isoform ...
LRGUK                 0.025   leucine-rich repeats and guanylate kinase domain con...
MAGI3                 0.023   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.023   membrane-associated guanylate kinase-related  3 iso...
TJP1                  0.022   tight junction protein 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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