Guide to the Human Genome
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Name: GRIP2 Sequence: fasta or formatted (1141aa) NCBI GI: 122937249
Description:

glutamate receptor interacting protein 2

Referenced in:

Glutamate
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         76           3
 C cysteine            1.7         19           2
 D aspartate           5.4         62           2
 E glutamate           7.8         89           5
 F phenylalanine       1.9         22           1
 G glycine             9.9        113           2
 H histidine           2.8         32           1
 I isoleucine          4.5         51           2
 K lysine              3.8         43           2
 L leucine            10.2        116           3
 M methionine          1.3         15           1
 N asparagine          1.9         22           2
 P proline             8.2         94           3
 Q glutamine           3.0         34           1
 R arginine            7.6         87           3
 S serine              8.9        101           2
 T threonine           6.1         70           3
 V valine              6.4         73           2
 W tryptophan          1.0         11           2
 Y tyrosine            1.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor interacting protein 2 
GRIP1                 0.490   glutamate receptor interacting protein 1 
INADL                 0.036   InaD-like 
MPDZ                  0.035   multiple PDZ domain protein 
MAGI1                 0.031   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.031   membrane associated guanylate kinase, WW and PDZ dom...
SCRIB                 0.029   scribble isoform b 
SCRIB                 0.029   scribble isoform a 
DLG4                  0.027   post-synaptic density protein 95 isoform 1 
DLG4                  0.027   post-synaptic density protein 95 isoform 2 
DLG2                  0.027   chapsyn-110 isoform 3 
DLG2                  0.027   chapsyn-110 isoform 1 
DLG2                  0.027   chapsyn-110 isoform 2 
DLG1                  0.026   discs, large homolog 1 isoform 1 
DLG1                  0.026   discs, large homolog 1 isoform 2 
DLG3                  0.026   synapse-associated protein 102 isoform a 
FRMPD2                0.024   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.024   FERM and PDZ domain containing 2 isoform 3 
MAGI1                 0.024   membrane associated guanylate kinase, WW and PDZ dom...
PTPN13                0.023   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.023   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.023   protein tyrosine phosphatase, non-receptor type 13 is...
LNX1                  0.023   ligand of numb-protein X 1 isoform a 
LNX1                  0.023   ligand of numb-protein X 1 isoform b 
MAGI2                 0.021   membrane associated guanylate kinase, WW and PDZ dom...
PTPN13                0.021   protein tyrosine phosphatase, non-receptor type 13 i...
PDZD2                 0.021   PDZ domain containing 2 
IL16                  0.021   interleukin 16 isoform 2 
IL16                  0.021   interleukin 16 isoform 1 precursor 
LNX2                  0.020   ligand of numb-protein X 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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