Guide to the Human Genome
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Name: MPP7 Sequence: fasta or formatted (576aa) NCBI GI: 111154074
Description:

palmitoylated membrane protein 7

Referenced in:

PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         35           3
 C cysteine            0.5          3           1
 D aspartate           6.6         38           2
 E glutamate           8.2         47           2
 F phenylalanine       3.3         19           1
 G glycine             4.9         28           2
 H histidine           3.0         17           1
 I isoleucine          6.8         39           3
 K lysine              9.0         52           2
 L leucine             9.5         55           2
 M methionine          1.6          9           1
 N asparagine          3.6         21           2
 P proline             5.6         32           2
 Q glutamine           4.3         25           1
 R arginine            5.2         30           2
 S serine              6.8         39           2
 T threonine           5.0         29           2
 V valine              6.1         35           2
 W tryptophan          0.9          5           2
 Y tyrosine            3.1         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   palmitoylated membrane protein 7 
MPP3                  0.536   palmitoylated membrane protein 3 
MPP4                  0.383   membrane protein, palmitoylated 4 
MPP5                  0.330   membrane protein, palmitoylated 5 
MPP2                  0.292   palmitoylated membrane protein 2 
MPP6                  0.283   membrane protein, palmitoylated 6 
CASK                  0.268   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.262   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.253   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.230   palmitoylated membrane protein 1 
DLG2                  0.154   chapsyn-110 isoform 1 
DLG2                  0.154   chapsyn-110 isoform 2 
DLG3                  0.152   synapse-associated protein 102 isoform b 
DLG3                  0.150   synapse-associated protein 102 isoform a 
DLG1                  0.146   discs, large homolog 1 isoform 2 
DLG1                  0.143   discs, large homolog 1 isoform 1 
DLG2                  0.141   chapsyn-110 isoform 3 
DLG4                  0.124   post-synaptic density protein 95 isoform 1 
DLG4                  0.124   post-synaptic density protein 95 isoform 2 
DLG2                  0.124   chapsyn-110 isoform 4 
GUK1                  0.079   guanylate kinase 1 isoform b 
GUK1                  0.079   guanylate kinase 1 isoform a 
GUK1                  0.079   guanylate kinase 1 isoform b 
DLG5                  0.069   discs large homolog 5 
TJP3                  0.040   tight junction protein 3 
LRGUK                 0.039   leucine-rich repeats and guanylate kinase domain con...
TJP2                  0.035   tight junction protein 2 (zona occludens 2) isoform ...
LIN7C                 0.030   lin-7 homolog C 
GRIP1                 0.030   glutamate receptor interacting protein 1 
GOPC                  0.030   golgi associated PDZ and coiled-coil motif containing...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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