CTAG1B 28509

Name: CTAG1B	Sequence: fasta or formatted (180aa)		NCBI GI: 4503119
Description: cancer/testis antigen 1B		Referenced in: Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.2 22 2 C cysteine 2.8 5 2 D aspartate 2.8 5 1 E glutamate 3.9 7 1 F phenylalanine 2.8 5 1 G glycine 19.4 35 3 H histidine 1.1 2 1 I isoleucine 2.8 5 1 K lysine 0.6 1 1 L leucine 10.6 19 2 M methionine 2.2 4 1 N asparagine 1.7 3 1 P proline 10.6 19 2 Q glutamine 5.0 9 2 R arginine 7.8 14 2 S serine 6.1 11 2 T threonine 4.4 8 1 V valine 2.2 4 1 W tryptophan 0.6 1 1 Y tyrosine 0.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cancer/testis antigen 1B CTAG1A 1.000 cancer/testis antigen 1A CTAG2 0.840 cancer/testis antigen 2 isoform LAGE-1a CTAG2 0.590 cancer/testis antigen 2 isoform LAGE-1b LOC100293202 0.201 PREDICTED: similar to CTL-recognized antigen on mel... LAGE3 0.166 L antigen family, member 3 COL1A1 0.095 alpha 1 type I collagen preproprotein COL11A1 0.080 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.080 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.080 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100293055 0.080 PREDICTED: similar to COL22A1 protein COL2A1 0.080 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.080 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.077 collagen type III alpha 1 preproprotein COL1A2 0.077 alpha 2 type I collagen COL12A1 0.077 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.077 collagen, type XII, alpha 1 long isoform precursor [... KRT10 0.077 keratin 10 COL11A2 0.074 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.074 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.074 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL9A3 0.074 alpha 3 type IX collagen POU4F1 0.074 POU domain, class 4, transcription factor 1 COL14A1 0.072 collagen, type XIV, alpha 1 COL7A1 0.072 alpha 1 type VII collagen precursor COL28A1 0.072 collagen, type XXVIII precursor COL6A3 0.072 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.072 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.072 alpha 3 type VI collagen isoform 4 precursor COL22A1 0.072 collagen, type XXII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.