Guide to the Human Genome
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Name: KRT10 Sequence: fasta or formatted (584aa) NCBI GI: 195972866
Description:

keratin 10

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         22           2
 C cysteine            0.7          4           1
 D aspartate           3.3         19           2
 E glutamate           7.5         44           3
 F phenylalanine       3.1         18           1
 G glycine            25.7        150           8
 H histidine           1.4          8           1
 I isoleucine          3.3         19           1
 K lysine              3.9         23           2
 L leucine             8.0         47           2
 M methionine          1.0          6           1
 N asparagine          4.3         25           2
 P proline             0.5          3           1
 Q glutamine           4.5         26           2
 R arginine            4.1         24           2
 S serine             15.2         89           4
 T threonine           2.7         16           2
 V valine              2.4         14           1
 W tryptophan          0.3          2           1
 Y tyrosine            4.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 10 
KRT9                  0.499   keratin 9 
KRT24                 0.430   keratin 24 
KRT14                 0.404   keratin 14 
KRT13                 0.402   keratin 13 isoform b 
KRT13                 0.402   keratin 13 isoform a 
KRT16                 0.402   keratin 16 
KRT15                 0.401   keratin 15 
KRT12                 0.400   keratin 12 
KRT28                 0.384   keratin 25D 
KRT17                 0.380   keratin 17 
KRT27                 0.376   keratin 27 
KRT25                 0.368   keratin 25 
KRT19                 0.354   keratin 19 
KRT26                 0.339   keratin 26 
KRT1                  0.299   keratin 1 
KRT36                 0.289   keratin 36 
KRT35                 0.286   keratin 35 
KRT32                 0.270   keratin 32 
KRT31                 0.267   keratin 31 
KRT33A                0.266   keratin 33A 
KRT2                  0.264   keratin 2 
KRT33B                0.262   type I hair keratin 3B 
KRT20                 0.261   keratin 20 
KRT18                 0.259   keratin 18 
KRT18                 0.259   keratin 18 
KRT34                 0.254   keratin 34 
KRT3                  0.237   keratin 3 
KRT76                 0.235   keratin 76 
KRT40                 0.234   type I hair keratin KA36 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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