Guide to the Human Genome
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Name: DEFB119 Sequence: fasta or formatted (84aa) NCBI GI: 37704382
Description:

defensin, beta 119 isoform a precursor

Referenced in:

Additional Host Defense Functions

Other entries for this name:
alt prot [88aa] defensin, beta 119 isoform c precursor
alt prot [43aa] defensin, beta 119 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          3           1
 C cysteine            8.3          7           2
 D aspartate           1.2          1           1
 E glutamate           7.1          6           2
 F phenylalanine       1.2          1           1
 G glycine             4.8          4           1
 H histidine           1.2          1           1
 I isoleucine          8.3          7           1
 K lysine              7.1          6           2
 L leucine            11.9         10           2
 M methionine          3.6          3           1
 N asparagine          4.8          4           1
 P proline             4.8          4           1
 Q glutamine           4.8          4           1
 R arginine            7.1          6           1
 S serine              9.5          8           1
 T threonine           1.2          1           1
 V valine              1.2          1           1
 W tryptophan          2.4          2           1
 Y tyrosine            6.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   defensin, beta 119 isoform a precursor 
DEFB119               0.217   defensin, beta 119 isoform c precursor 
DEFB123               0.134   defensin, beta 123 precursor 
DEFB121               0.127   defensin, beta 121 
DEFB118               0.115   beta-defensin 118 
DEFB119               0.102   defensin, beta 119 isoform b 
DEFB127               0.083   defensin, beta 127 preproprotein 
DEFB116               0.076   beta-defensin 116 
DEFB126               0.076   defensin, beta 126 preproprotein 
DEFB124               0.070   beta-defensin 124 
DEFB115               0.051   beta-defensin 115 
DEFB135               0.045   beta-defensin 135 
DEFB128               0.045   beta-defensin 128 
DEFB125               0.045   defensin, beta 125 preproprotein 
DEFB134               0.038   beta-defensin 134 
DEFB132               0.038   beta-defensin 32 precursor 
DEFB117               0.032   PREDICTED: defensin, beta 117 
DEFB117               0.032   PREDICTED: defensin, beta 117 
DEFB117               0.032   PREDICTED: defensin, beta 117 
DEFB104A              0.032   defensin, beta 104A precursor 
DEFB104B              0.032   defensin, beta 104B precursor 
DEFB105A              0.025   defensin, beta 105A precursor 
CLCA4                 0.025   chloride channel accessory 4 
COX19                 0.025   COX19 cytochrome c oxidase assembly homolog 
DEFB105B              0.025   defensin, beta 105B precursor 
DEFB106A              0.025   defensin, beta 106A precursor 
DEFB111               0.025   beta-defensin 111 
DEFB106B              0.025   defensin, beta 106B precursor 
DEFB108B              0.019   beta-defensin 108B 
DEFB113               0.019   beta-defensin 113 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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