Guide to the Human Genome
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Name: DEFB128 Sequence: fasta or formatted (93aa) NCBI GI: 83582802
Description:

beta-defensin 128

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.2          2           1
 C cysteine            6.5          6           2
 D aspartate           3.2          3           1
 E glutamate           7.5          7           3
 F phenylalanine       5.4          5           1
 G glycine             6.5          6           1
 H histidine           3.2          3           1
 I isoleucine          7.5          7           2
 K lysine             14.0         13           2
 L leucine            12.9         12           2
 M methionine          1.1          1           1
 N asparagine          2.2          2           1
 P proline             2.2          2           1
 Q glutamine           2.2          2           1
 R arginine            3.2          3           1
 S serine              4.3          4           1
 T threonine           5.4          5           1
 V valine              7.5          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-defensin 128 
DEFB127               0.219   defensin, beta 127 preproprotein 
DEFB118               0.142   beta-defensin 118 
DEFB123               0.095   defensin, beta 123 precursor 
DEFB115               0.089   beta-defensin 115 
DEFB125               0.059   defensin, beta 125 preproprotein 
DEFB117               0.059   PREDICTED: defensin, beta 117 
DEFB117               0.059   PREDICTED: defensin, beta 117 
DEFB117               0.059   PREDICTED: defensin, beta 117 
DEFB132               0.059   beta-defensin 32 precursor 
DEFB121               0.059   defensin, beta 121 
DEFB124               0.047   beta-defensin 124 
DEFB135               0.041   beta-defensin 135 
DEFB119               0.041   defensin, beta 119 isoform a precursor 
DEFB126               0.041   defensin, beta 126 preproprotein 
LOC100287106          0.030   PREDICTED: hypothetical protein XP_002342470 
DEFB119               0.030   defensin, beta 119 isoform c precursor 
RBBP8                 0.024   retinoblastoma binding protein 8 isoform b 
RBBP8                 0.024   retinoblastoma binding protein 8 isoform a 
RBBP8                 0.024   retinoblastoma binding protein 8 isoform a 
DEFB104A              0.018   defensin, beta 104A precursor 
DEFB104B              0.018   defensin, beta 104B precursor 
LOC100133128          0.018   PREDICTED: hypothetical protein 
LOC100133128          0.018   PREDICTED: hypothetical protein 
LOC100133128          0.018   PREDICTED: hypothetical protein 
NRIP3                 0.012   nuclear receptor interacting protein 3 
DEFB106A              0.012   defensin, beta 106A precursor 
DEFB108B              0.012   beta-defensin 108B 
DEFB129               0.012   beta defensin 129 precursor 
DEFB106B              0.012   defensin, beta 106B precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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