Guide to the Human Genome
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Name: COX19 Sequence: fasta or formatted (90aa) NCBI GI: 71979925
Description:

COX19 cytochrome c oxidase assembly homolog

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          3           1
 C cysteine            4.4          4           1
 D aspartate           3.3          3           1
 E glutamate          11.1         10           1
 F phenylalanine       7.8          7           1
 G glycine             6.7          6           1
 H histidine           2.2          2           1
 I isoleucine          0.0          0           0
 K lysine             14.4         13           2
 L leucine            11.1         10           1
 M methionine          5.6          5           1
 N asparagine          5.6          5           3
 P proline             5.6          5           2
 Q glutamine           2.2          2           1
 R arginine            4.4          4           1
 S serine              7.8          7           1
 T threonine           3.3          3           1
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine            1.1          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   COX19 cytochrome c oxidase assembly homolog 
NDUFS5                0.048   NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa...
DEFB119               0.024   defensin, beta 119 isoform a precursor 
HGS                   0.024   hepatocyte growth factor-regulated tyrosine kinase su...
HELZ                  0.024   helicase with zinc finger domain 
CHCHD1                0.018   coiled-coil-helix-coiled-coil-helix domain containin...
HELQ                  0.012   DNA helicase HEL308 
ETV6                  0.006   ets variant 6 
CHCHD3                0.006   coiled-coil-helix-coiled-coil-helix domain containing...
RNF157                0.006   ring finger protein 157 
LAMA3                 0.006   laminin alpha 3 subunit isoform 1 
LAMA3                 0.006   laminin alpha 3 subunit isoform 4 
LAMA3                 0.006   laminin alpha 3 subunit isoform 3 
LAMA3                 0.006   laminin alpha 3 subunit isoform 2 
LONRF3                0.006   LON peptidase N-terminal domain and ring finger 3 is...
LONRF3                0.006   LON peptidase N-terminal domain and ring finger 3 is...
C12orf65              0.006   hypothetical protein LOC91574 
C12orf65              0.006   hypothetical protein LOC91574 
GLG1                  0.006   golgi apparatus protein 1 isoform 3 
GLG1                  0.006   golgi apparatus protein 1 isoform 2 
GLG1                  0.006   golgi apparatus protein 1 isoform 1 
CHCHD7                0.006   coiled-coil-helix-coiled-coil-helix domain containin...
CHCHD7                0.006   coiled-coil-helix-coiled-coil-helix domain containin...
CHCHD7                0.006   coiled-coil-helix-coiled-coil-helix domain containin...
CYP7B1                0.000   cytochrome P450, family 7, subfamily B, polypeptide 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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