Name: DEFB135 | Sequence: fasta or formatted (77aa) | NCBI GI: 116517226 | |
Description: beta-defensin 135
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.9 3 1 C cysteine 7.8 6 2 D aspartate 1.3 1 1 E glutamate 1.3 1 1 F phenylalanine 2.6 2 1 G glycine 5.2 4 1 H histidine 1.3 1 1 I isoleucine 6.5 5 1 K lysine 6.5 5 1 L leucine 15.6 12 2 M methionine 1.3 1 1 N asparagine 5.2 4 1 P proline 7.8 6 2 Q glutamine 3.9 3 1 R arginine 6.5 5 1 S serine 3.9 3 1 T threonine 5.2 4 1 V valine 7.8 6 2 W tryptophan 1.3 1 1 Y tyrosine 5.2 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 beta-defensin 135 DEFB123 0.184 defensin, beta 123 precursor DEFB121 0.177 defensin, beta 121 DEFB124 0.170 beta-defensin 124 DEFB118 0.099 beta-defensin 118 DEFB125 0.078 defensin, beta 125 preproprotein DEFB106A 0.071 defensin, beta 106A precursor DEFB106B 0.071 defensin, beta 106B precursor DEFB127 0.071 defensin, beta 127 preproprotein DEFB115 0.064 beta-defensin 115 DEFB117 0.057 PREDICTED: defensin, beta 117 DEFB117 0.057 PREDICTED: defensin, beta 117 DEFB117 0.057 PREDICTED: defensin, beta 117 DEFB128 0.050 beta-defensin 128 DEFB119 0.050 defensin, beta 119 isoform a precursor DEFB119 0.043 defensin, beta 119 isoform c precursor DEFB132 0.043 beta-defensin 32 precursor DEFB134 0.035 beta-defensin 134 DEFB105A 0.021 defensin, beta 105A precursor DEFB131 0.021 defensin, beta 131 DEFB105B 0.021 defensin, beta 105B precursor DEFB113 0.014 beta-defensin 113 HLA-DPB1 0.014 major histocompatibility complex, class II, DP beta ... LOC100293643 0.014 PREDICTED: similar to Fc fragment of IgG binding pr... LOC100133128 0.014 PREDICTED: hypothetical protein LOC100290309 0.014 PREDICTED: hypothetical protein XP_002348012 LOC100133128 0.014 PREDICTED: hypothetical protein FCGBP 0.014 Fc fragment of IgG binding protein KIAA0319 0.007 KIAA0319 DEFB116 0.007 beta-defensin 116Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.