Guide to the Human Genome
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Name: DEFB135 Sequence: fasta or formatted (77aa) NCBI GI: 116517226
Description:

beta-defensin 135

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          3           1
 C cysteine            7.8          6           2
 D aspartate           1.3          1           1
 E glutamate           1.3          1           1
 F phenylalanine       2.6          2           1
 G glycine             5.2          4           1
 H histidine           1.3          1           1
 I isoleucine          6.5          5           1
 K lysine              6.5          5           1
 L leucine            15.6         12           2
 M methionine          1.3          1           1
 N asparagine          5.2          4           1
 P proline             7.8          6           2
 Q glutamine           3.9          3           1
 R arginine            6.5          5           1
 S serine              3.9          3           1
 T threonine           5.2          4           1
 V valine              7.8          6           2
 W tryptophan          1.3          1           1
 Y tyrosine            5.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-defensin 135 
DEFB123               0.184   defensin, beta 123 precursor 
DEFB121               0.177   defensin, beta 121 
DEFB124               0.170   beta-defensin 124 
DEFB118               0.099   beta-defensin 118 
DEFB125               0.078   defensin, beta 125 preproprotein 
DEFB106A              0.071   defensin, beta 106A precursor 
DEFB106B              0.071   defensin, beta 106B precursor 
DEFB127               0.071   defensin, beta 127 preproprotein 
DEFB115               0.064   beta-defensin 115 
DEFB117               0.057   PREDICTED: defensin, beta 117 
DEFB117               0.057   PREDICTED: defensin, beta 117 
DEFB117               0.057   PREDICTED: defensin, beta 117 
DEFB128               0.050   beta-defensin 128 
DEFB119               0.050   defensin, beta 119 isoform a precursor 
DEFB119               0.043   defensin, beta 119 isoform c precursor 
DEFB132               0.043   beta-defensin 32 precursor 
DEFB134               0.035   beta-defensin 134 
DEFB105A              0.021   defensin, beta 105A precursor 
DEFB131               0.021   defensin, beta 131 
DEFB105B              0.021   defensin, beta 105B precursor 
DEFB113               0.014   beta-defensin 113 
HLA-DPB1              0.014   major histocompatibility complex, class II, DP beta ...
LOC100293643          0.014   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100133128          0.014   PREDICTED: hypothetical protein 
LOC100290309          0.014   PREDICTED: hypothetical protein XP_002348012 
LOC100133128          0.014   PREDICTED: hypothetical protein 
FCGBP                 0.014   Fc fragment of IgG binding protein 
KIAA0319              0.007   KIAA0319 
DEFB116               0.007   beta-defensin 116 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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