Name: DEFB115 | Sequence: fasta or formatted (88aa) | NCBI GI: 83582798 | |
Description: beta-defensin 115
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.4 3 1 C cysteine 6.8 6 2 D aspartate 5.7 5 1 E glutamate 8.0 7 1 F phenylalanine 1.1 1 1 G glycine 5.7 5 1 H histidine 4.5 4 1 I isoleucine 6.8 6 1 K lysine 12.5 11 2 L leucine 10.2 9 1 M methionine 1.1 1 1 N asparagine 0.0 0 0 P proline 4.5 4 1 Q glutamine 2.3 2 1 R arginine 5.7 5 2 S serine 6.8 6 1 T threonine 3.4 3 1 V valine 6.8 6 2 W tryptophan 1.1 1 1 Y tyrosine 3.4 3 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 beta-defensin 115 DEFB118 0.160 beta-defensin 118 DEFB123 0.117 defensin, beta 123 precursor DEFB121 0.104 defensin, beta 121 DEFB126 0.104 defensin, beta 126 preproprotein DEFB104A 0.092 defensin, beta 104A precursor DEFB104B 0.092 defensin, beta 104B precursor DEFB128 0.092 beta-defensin 128 DEFB129 0.086 beta defensin 129 precursor DEFB117 0.080 PREDICTED: defensin, beta 117 DEFB117 0.080 PREDICTED: defensin, beta 117 DEFB117 0.080 PREDICTED: defensin, beta 117 DEFB116 0.061 beta-defensin 116 DEFB135 0.055 beta-defensin 135 DEFB119 0.049 defensin, beta 119 isoform a precursor DEFB124 0.049 beta-defensin 124 DEFB105A 0.049 defensin, beta 105A precursor DEFB105B 0.049 defensin, beta 105B precursor LOC100133128 0.043 PREDICTED: hypothetical protein LOC100133128 0.043 PREDICTED: hypothetical protein DEFB114 0.031 beta-defensin 114 LOC100133128 0.025 PREDICTED: hypothetical protein DEFB108B 0.025 beta-defensin 108B TSPAN14 0.025 tetraspanin 14 isoform 2 TSPAN14 0.025 tetraspanin 14 isoform 1 DEFB119 0.025 defensin, beta 119 isoform c precursor DEFB127 0.018 defensin, beta 127 preproprotein DEFB125 0.012 defensin, beta 125 preproprotein NGFR 0.006 nerve growth factor receptor precursor CD38 0.006 CD38 antigenHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.