Name: DEFB104B | Sequence: fasta or formatted (72aa) | NCBI GI: 103485137 | |
Description: defensin, beta 104B precursor
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.2 3 1 C cysteine 8.3 6 2 D aspartate 4.2 3 1 E glutamate 5.6 4 1 F phenylalanine 1.4 1 1 G glycine 4.2 3 1 H histidine 0.0 0 0 I isoleucine 4.2 3 1 K lysine 5.6 4 2 L leucine 16.7 12 3 M methionine 1.4 1 1 N asparagine 2.8 2 1 P proline 4.2 3 1 Q glutamine 4.2 3 1 R arginine 13.9 10 1 S serine 5.6 4 1 T threonine 4.2 3 1 V valine 2.8 2 1 W tryptophan 1.4 1 1 Y tyrosine 5.6 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 defensin, beta 104B precursor DEFB104A 1.000 defensin, beta 104A precursor DEFB108B 0.171 beta-defensin 108B LOC100133128 0.171 PREDICTED: hypothetical protein LOC100133128 0.163 PREDICTED: hypothetical protein LOC100133128 0.163 PREDICTED: hypothetical protein DEFB115 0.116 beta-defensin 115 DEFB118 0.085 beta-defensin 118 DEFB124 0.078 beta-defensin 124 DEFB121 0.070 defensin, beta 121 DEFB111 0.070 beta-defensin 111 DEFB105A 0.062 defensin, beta 105A precursor DEFB105B 0.062 defensin, beta 105B precursor DEFB116 0.054 beta-defensin 116 DEFB127 0.054 defensin, beta 127 preproprotein LOC100290235 0.047 PREDICTED: hypothetical protein XP_002347009 DEFB131 0.039 defensin, beta 131 DEFB129 0.039 beta defensin 129 precursor LOC100128174 0.039 PREDICTED: similar to defensin, beta 131 DEFB119 0.039 defensin, beta 119 isoform a precursor GPAM 0.023 mitochondrial glycerol 3-phosphate acyltransferase ... LOC100129216 0.023 PREDICTED: similar to defensin, beta 131 LOC100128174 0.023 PREDICTED: hypothetical protein LOC100129216 0.023 PREDICTED: similar to defensin, beta 131 LOC100128174 0.023 PREDICTED: similar to defensin, beta 131 LOC100129216 0.023 PREDICTED: similar to defensin, beta 131 DEFB128 0.023 beta-defensin 128 DEFA6 0.023 defensin, alpha 6 preproprotein DEFB112 0.023 beta-defensin 112 DEFB123 0.023 defensin, beta 123 precursorHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.