Guide to the Human Genome
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Name: DEFB124 Sequence: fasta or formatted (71aa) NCBI GI: 82734223
Description:

beta-defensin 124

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          4           1
 C cysteine            8.5          6           2
 D aspartate           1.4          1           1
 E glutamate           5.6          4           1
 F phenylalanine       2.8          2           1
 G glycine             5.6          4           1
 H histidine           4.2          3           1
 I isoleucine          0.0          0           0
 K lysine              5.6          4           1
 L leucine            15.5         11           3
 M methionine          2.8          2           1
 N asparagine          0.0          0           0
 P proline             8.5          6           3
 Q glutamine           5.6          4           1
 R arginine            4.2          3           1
 S serine              5.6          4           1
 T threonine           5.6          4           1
 V valine              5.6          4           1
 W tryptophan          1.4          1           1
 Y tyrosine            5.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-defensin 124 
DEFB135               0.182   beta-defensin 135 
DEFB123               0.121   defensin, beta 123 precursor 
DEFB121               0.114   defensin, beta 121 
DEFB127               0.114   defensin, beta 127 preproprotein 
DEFB125               0.114   defensin, beta 125 preproprotein 
DEFB132               0.098   beta-defensin 32 precursor 
DEFB118               0.098   beta-defensin 118 
DEFB119               0.083   defensin, beta 119 isoform a precursor 
DEFB104A              0.076   defensin, beta 104A precursor 
DEFB104B              0.076   defensin, beta 104B precursor 
DEFB108B              0.068   beta-defensin 108B 
LOC100133128          0.061   PREDICTED: hypothetical protein 
LOC100133128          0.061   PREDICTED: hypothetical protein 
LOC100133128          0.061   PREDICTED: hypothetical protein 
DEFB115               0.061   beta-defensin 115 
LOC100290235          0.061   PREDICTED: hypothetical protein XP_002347009 
DEFB116               0.061   beta-defensin 116 
DEFB128               0.061   beta-defensin 128 
PRLR                  0.045   prolactin receptor 
DEFB126               0.038   defensin, beta 126 preproprotein 
DEFB106A              0.038   defensin, beta 106A precursor 
DEFB106B              0.038   defensin, beta 106B precursor 
SPAG11B               0.030   sperm associated antigen 11B isoform C preproprotein...
MUC5AC                0.023   mucin 5AC 
MUC5B                 0.023   mucin 5, subtype B, tracheobronchial 
DEFB110               0.023   beta-defensin 110 
RSC1A1                0.023   regulatory solute carrier protein, family 1, member 1...
DEFB117               0.015   PREDICTED: defensin, beta 117 
LOC100291911          0.015   PREDICTED: similar to Putative uncharacterized prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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