Name: DEFB123 | Sequence: fasta or formatted (67aa) | NCBI GI: 23503331 | |
Description: defensin, beta 123 precursor
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 0.0 0 0 C cysteine 9.0 6 2 D aspartate 0.0 0 0 E glutamate 3.0 2 1 F phenylalanine 1.5 1 1 G glycine 4.5 3 2 H histidine 0.0 0 0 I isoleucine 1.5 1 1 K lysine 11.9 8 2 L leucine 16.4 11 4 M methionine 3.0 2 1 N asparagine 4.5 3 2 P proline 6.0 4 1 Q glutamine 4.5 3 1 R arginine 7.5 5 1 S serine 3.0 2 1 T threonine 6.0 4 1 V valine 6.0 4 1 W tryptophan 4.5 3 2 Y tyrosine 7.5 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 defensin, beta 123 precursor DEFB121 0.331 defensin, beta 121 DEFB118 0.228 beta-defensin 118 DEFB135 0.205 beta-defensin 135 DEFB116 0.173 beta-defensin 116 DEFB125 0.165 defensin, beta 125 preproprotein DEFB119 0.165 defensin, beta 119 isoform a precursor DEFB115 0.150 beta-defensin 115 DEFB119 0.134 defensin, beta 119 isoform c precursor DEFB124 0.126 beta-defensin 124 DEFB128 0.126 beta-defensin 128 DEFB132 0.118 beta-defensin 32 precursor LOC100287066 0.079 PREDICTED: hypothetical protein XP_002342880 LOC100128174 0.079 PREDICTED: similar to defensin, beta 131 LOC100128174 0.079 PREDICTED: hypothetical protein LOC100128174 0.079 PREDICTED: similar to defensin, beta 131 DEFB127 0.079 defensin, beta 127 preproprotein LOC100129216 0.071 PREDICTED: similar to defensin, beta 131 LOC100129216 0.071 PREDICTED: similar to defensin, beta 131 LOC100129216 0.071 PREDICTED: similar to defensin, beta 131 LOC100133128 0.071 PREDICTED: hypothetical protein DEFB108B 0.071 beta-defensin 108B DEFB129 0.071 beta defensin 129 precursor DEFB117 0.063 PREDICTED: defensin, beta 117 DEFB117 0.063 PREDICTED: defensin, beta 117 DEFB117 0.063 PREDICTED: defensin, beta 117 LOC100133128 0.063 PREDICTED: hypothetical protein LOC100133128 0.063 PREDICTED: hypothetical protein DEFB131 0.063 defensin, beta 131 DEFB114 0.055 beta-defensin 114Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.