Guide to the Human Genome
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Name: DEFB132 Sequence: fasta or formatted (95aa) NCBI GI: 46409558
Description:

beta-defensin 32 precursor

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3          6           2
 C cysteine            7.4          7           2
 D aspartate           2.1          2           1
 E glutamate           1.1          1           1
 F phenylalanine       4.2          4           1
 G glycine             6.3          6           2
 H histidine           2.1          2           1
 I isoleucine          3.2          3           1
 K lysine              7.4          7           2
 L leucine            10.5         10           3
 M methionine          2.1          2           1
 N asparagine          4.2          4           1
 P proline             5.3          5           1
 Q glutamine           6.3          6           2
 R arginine            6.3          6           3
 S serine              8.4          8           1
 T threonine           8.4          8           2
 V valine              4.2          4           1
 W tryptophan          2.1          2           1
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-defensin 32 precursor 
DEFB118               0.134   beta-defensin 118 
DEFB121               0.106   defensin, beta 121 
DEFB125               0.101   defensin, beta 125 preproprotein 
DEFB123               0.084   defensin, beta 123 precursor 
DEFB124               0.073   beta-defensin 124 
LOC100133128          0.067   PREDICTED: hypothetical protein 
LOC100133128          0.056   PREDICTED: hypothetical protein 
LOC100133128          0.056   PREDICTED: hypothetical protein 
DEFB108B              0.056   beta-defensin 108B 
DEFB128               0.056   beta-defensin 128 
DEFB119               0.039   defensin, beta 119 isoform c precursor 
DEFB135               0.034   beta-defensin 135 
DEFB119               0.034   defensin, beta 119 isoform a precursor 
LOC100292541          0.028   PREDICTED: hypothetical protein 
DEFB106A              0.028   defensin, beta 106A precursor 
DEFB127               0.028   defensin, beta 127 preproprotein 
DEFB106B              0.028   defensin, beta 106B precursor 
LOC100287535          0.022   PREDICTED: hypothetical protein XP_002343194 
DEFB116               0.017   beta-defensin 116 
LOC100293245          0.011   PREDICTED: similar to beta-defensin 130 
LOC100290863          0.011   PREDICTED: hypothetical protein XP_002346650 
LOC100288554          0.011   PREDICTED: hypothetical protein XP_002342487 
LOC100133267          0.011   PREDICTED: similar to beta-defensin 130 
DEFB130               0.011   beta-defensin 130 
TTR                   0.011   transthyretin precursor 
DEFB134               0.006   beta-defensin 134 
FBN2                  0.006   fibrillin 2 precursor 
TNFRSF25              0.006   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.006   tumor necrosis factor receptor superfamily, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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