Guide to the Human Genome
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Name: C7orf51 Sequence: fasta or formatted (841aa) NCBI GI: 37537554
Description:

hypothetical protein FLJ37538

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         82           3
 C cysteine            2.0         17           1
 D aspartate           2.7         23           1
 E glutamate           6.1         51           6
 F phenylalanine       1.1          9           1
 G glycine            11.8         99           4
 H histidine           3.1         26           2
 I isoleucine          1.9         16           1
 K lysine              4.5         38           2
 L leucine             7.5         63           4
 M methionine          1.8         15           1
 N asparagine          1.2         10           1
 P proline            14.9        125           8
 Q glutamine           3.2         27           2
 R arginine            8.1         68           2
 S serine              8.7         73           3
 T threonine           5.1         43           2
 V valine              4.8         40           2
 W tryptophan          0.7          6           1
 Y tyrosine            1.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein FLJ37538 
KIAA1486              0.107   hypothetical protein LOC57624 
LOC100293817          0.107   PREDICTED: similar to hCG1811893 
MYO16                 0.072   myosin heavy chain Myr 8 
NACA                  0.046   nascent polypeptide-associated complex alpha subuni...
PRB2                  0.040   proline-rich protein BstNI subfamily 2 
WIPF1                 0.035   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.035   WAS/WASL interacting protein family, member 1 
PRB1                  0.033   proline-rich protein BstNI subfamily 1 isoform 1 pre...
WIPF2                 0.028   WIRE protein 
PRB3                  0.027   proline-rich protein BstNI subfamily 3 precursor [H...
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
FMN2                  0.025   formin 2 
KIAA1522              0.025   hypothetical protein LOC57648 
PRG4                  0.025   proteoglycan 4 isoform D 
PRG4                  0.025   proteoglycan 4 isoform C 
PRG4                  0.025   proteoglycan 4 isoform B 
PRG4                  0.025   proteoglycan 4 isoform A 
ATN1                  0.025   atrophin-1 
ATN1                  0.025   atrophin-1 
SRRM1                 0.024   serine/arginine repetitive matrix 1 
TAF4                  0.024   TBP-associated factor 4 
MLL2                  0.024   myeloid/lymphoid or mixed-lineage leukemia 2 
BAT2                  0.023   HLA-B associated transcript-2 
CASKIN1               0.023   CASK interacting protein 1 
SHANK1                0.022   SH3 and multiple ankyrin repeat domains 1 
CASKIN2               0.021   cask-interacting protein 2 isoform b 
CASKIN2               0.021   cask-interacting protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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