PRG4 10379

Name: PRG4	Sequence: fasta or formatted (1270aa)		NCBI GI: 189181724
Description: proteoglycan 4 isoform D		Referenced in: Bone and Related Tissues Ovary, Uterus and Placenta
Other entries for this name: alt prot [1363aa] proteoglycan 4 isoform B alt prot [1311aa] proteoglycan 4 isoform C alt prot [1404aa] proteoglycan 4 isoform A
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 101 3 C cysteine 1.1 14 2 D aspartate 2.6 33 1 E glutamate 7.4 94 2 F phenylalanine 1.7 21 3 G glycine 2.8 36 2 H histidine 0.6 7 1 I isoleucine 2.5 32 3 K lysine 11.7 148 3 L leucine 3.5 45 5 M methionine 1.0 13 1 N asparagine 2.4 30 1 P proline 18.3 233 3 Q glutamine 2.0 25 2 R arginine 2.8 36 4 S serine 4.9 62 2 T threonine 21.7 275 4 V valine 2.9 37 2 W tryptophan 0.6 7 1 Y tyrosine 1.7 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteoglycan 4 isoform D PRG4 0.992 proteoglycan 4 isoform C PRG4 0.947 proteoglycan 4 isoform B PRG4 0.947 proteoglycan 4 isoform A MUC2 0.142 mucin 2 precursor NACA 0.106 nascent polypeptide-associated complex alpha subuni... DPCR1 0.084 diffuse panbronchiolitis critical region 1 protein ... LOC100294420 0.078 PREDICTED: similar to mucin 2 LOC100294236 0.075 PREDICTED: similar to diffuse panbronchiolitis crit... MDC1 0.069 mediator of DNA-damage checkpoint 1 MUC17 0.068 mucin 17 MUC6 0.066 mucin 6, gastric ZAN 0.065 zonadhesin isoform 3 ZAN 0.065 zonadhesin isoform 6 TTN 0.063 titin isoform N2-A MUC4 0.060 mucin 4 isoform a LOC284297 0.058 hypothetical protein LOC284297 PCLO 0.058 piccolo isoform 2 PCLO 0.058 piccolo isoform 1 MUC5AC 0.057 mucin 5AC KIAA0754 0.057 hypothetical protein LOC643314 MUC5B 0.056 mucin 5, subtype B, tracheobronchial FLJ22184 0.056 PREDICTED: hypothetical protein FLJ22184 MUC3A 0.055 PREDICTED: mucin 3A, intestinal RAPH1 0.055 Ras association and pleckstrin homology domains 1 is... POLR2A 0.053 DNA-directed RNA polymerase II A LOC100131514 0.051 PREDICTED: similar to hCG1747327, partial MUC3A 0.050 PREDICTED: mucin 3A, cell surface associated, parti... NEFH 0.050 neurofilament, heavy polypeptide 200kDa MUC12 0.049 PREDICTED: mucin 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.