Guide to the Human Genome
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Name: MYO16 Sequence: fasta or formatted (1858aa) NCBI GI: 62177127
Description:

myosin heavy chain Myr 8

Referenced in:

Ankyrin Family
Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        129           3
 C cysteine            2.0         38           2
 D aspartate           5.1         94           2
 E glutamate           6.6        122           2
 F phenylalanine       3.7         68           3
 G glycine             5.6        104           2
 H histidine           2.9         53           2
 I isoleucine          4.5         83           2
 K lysine              5.9        109           3
 L leucine            11.6        215           3
 M methionine          2.3         42           2
 N asparagine          4.5         84           2
 P proline             7.6        141           8
 Q glutamine           4.8         89           2
 R arginine            4.8         90           2
 S serine              9.6        178           3
 T threonine           4.0         74           2
 V valine              4.7         87           2
 W tryptophan          0.5         10           1
 Y tyrosine            2.6         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin heavy chain Myr 8 
MYO3B                 0.113   myosin IIIB isoform 1 
MYO3B                 0.113   myosin IIIB isoform 2 
MYO3A                 0.112   myosin IIIA 
KIAA1486              0.089   hypothetical protein LOC57624 
LOC100293817          0.089   PREDICTED: similar to hCG1811893 
MYO10                 0.089   myosin X 
MYO15A                0.088   myosin XV 
MYO7B                 0.088   myosin VIIB 
MYO7A                 0.088   myosin VIIA isoform 2 
MYO7A                 0.088   myosin VIIA isoform 3 
MYO7A                 0.088   myosin VIIA isoform 1 
MYO1F                 0.083   myosin IF 
MYO1D                 0.082   myosin ID 
MYO1C                 0.082   myosin IC isoform b 
MYO1C                 0.082   myosin IC isoform a 
MYO1C                 0.082   myosin IC isoform c 
MYO5C                 0.082   myosin VC 
MYO5A                 0.081   myosin VA isoform 2 
MYO5A                 0.081   myosin VA isoform 1 
MYO1E                 0.081   myosin IE 
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH11                 0.077   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.077   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYO5B                 0.077   myosin VB 
MYH3                  0.076   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH9                  0.076   myosin, heavy polypeptide 9, non-muscle 
MYH15                 0.075   myosin, heavy polypeptide 15 
MYH10                 0.075   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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