Guide to the Human Genome
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Name: WIPF2 Sequence: fasta or formatted (440aa) NCBI GI: 18959210
Description:

WIRE protein

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         34           3
 C cysteine            0.2          1           1
 D aspartate           3.2         14           2
 E glutamate           3.2         14           2
 F phenylalanine       1.6          7           1
 G glycine             8.2         36           2
 H histidine           2.3         10           1
 I isoleucine          2.3         10           1
 K lysine              4.5         20           2
 L leucine             6.4         28           2
 M methionine          1.1          5           1
 N asparagine          3.4         15           1
 P proline            26.6        117           8
 Q glutamine           3.2         14           1
 R arginine            8.4         37           2
 S serine              9.5         42           3
 T threonine           4.1         18           2
 V valine              2.5         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WIRE protein 
WIPF1                 0.305   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.305   WAS/WASL interacting protein family, member 1 
WIPF3                 0.215   WAS/WASL interacting protein family, member 3 [Homo...
RAPH1                 0.106   Ras association and pleckstrin homology domains 1 is...
FMN2                  0.098   formin 2 
DIAPH1                0.091   diaphanous 1 isoform 2 
DIAPH1                0.091   diaphanous 1 isoform 1 
PRB2                  0.085   proline-rich protein BstNI subfamily 2 
SFPQ                  0.085   splicing factor proline/glutamine rich (polypyrimidin...
PRB3                  0.085   proline-rich protein BstNI subfamily 3 precursor [H...
NACA                  0.084   nascent polypeptide-associated complex alpha subuni...
CCNK                  0.084   cyclin K isoform 1 
SF1                   0.082   splicing factor 1 isoform 1 
MUC2                  0.081   mucin 2 precursor 
MLL2                  0.080   myeloid/lymphoid or mixed-lineage leukemia 2 
PRB1                  0.080   proline-rich protein BstNI subfamily 1 isoform 1 pre...
WASF2                 0.078   WAS protein family, member 2 
SF1                   0.077   splicing factor 1 isoform 2 
WASL                  0.075   Wiskott-Aldrich syndrome gene-like protein 
SRRM1                 0.074   serine/arginine repetitive matrix 1 
SF3A2                 0.073   splicing factor 3a, subunit 2 
FLJ22184              0.073   PREDICTED: hypothetical protein FLJ22184 
WBP11                 0.072   WW domain binding protein 11 
FLJ22184              0.072   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.072   PREDICTED: hypothetical protein LOC80164 
PCLO                  0.072   piccolo isoform 2 
PCLO                  0.072   piccolo isoform 1 
PRB4                  0.070   proline-rich protein BstNI subfamily 4 precursor [Ho...
CASKIN1               0.069   CASK interacting protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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