SRRM1 27954

Name: SRRM1	Sequence: fasta or formatted (904aa)		NCBI GI: 42542379
Description: serine/arginine repetitive matrix 1		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 50 7 C cysteine 0.1 1 1 D aspartate 2.3 21 2 E glutamate 6.6 60 2 F phenylalanine 1.1 10 2 G glycine 2.5 23 3 H histidine 2.0 18 1 I isoleucine 1.8 16 1 K lysine 11.3 102 7 L leucine 3.0 27 3 M methionine 1.0 9 2 N asparagine 1.9 17 1 P proline 15.7 142 5 Q glutamine 3.7 33 2 R arginine 15.9 144 5 S serine 16.7 151 8 T threonine 4.3 39 3 V valine 3.8 34 2 W tryptophan 0.3 3 1 Y tyrosine 0.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 serine/arginine repetitive matrix 1 SRRM2 0.105 splicing coactivator subunit SRm300 LOC100170229 0.074 hypothetical protein LOC100170229 PRG4 0.068 proteoglycan 4 isoform B PRG4 0.068 proteoglycan 4 isoform A PRG4 0.063 proteoglycan 4 isoform D PRG4 0.063 proteoglycan 4 isoform C FLJ37078 0.061 hypothetical protein LOC222183 ZC3H18 0.061 zinc finger CCCH-type containing 18 NACA 0.058 nascent polypeptide-associated complex alpha subuni... SFRS16 0.056 splicing factor, arginine/serine-rich 16 FLJ22184 0.056 PREDICTED: hypothetical protein FLJ22184 NEFH 0.056 neurofilament, heavy polypeptide 200kDa SCAF1 0.052 SR-related CTD-associated factor 1 KIAA1853 0.052 KIAA1853 protein PRPF4B 0.049 serine/threonine-protein kinase PRP4K PCLO 0.049 piccolo isoform 2 PCLO 0.049 piccolo isoform 1 FLJ22184 0.048 PREDICTED: hypothetical protein LOC80164 C2orf16 0.048 hypothetical protein LOC84226 MUC2 0.047 mucin 2 precursor PRB2 0.047 proline-rich protein BstNI subfamily 2 CASKIN1 0.046 CASK interacting protein 1 CRKRS 0.046 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.046 Cdc2-related kinase, arginine/serine-rich isoform 1... FLJ22184 0.045 PREDICTED: hypothetical protein FLJ22184 RBBP6 0.045 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.045 retinoblastoma-binding protein 6 isoform 1 LOC100286959 0.044 PREDICTED: hypothetical protein XP_002343921 ACIN1 0.044 apoptotic chromatin condensation inducer 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.