PRG4 10377

Name: PRG4	Sequence: fasta or formatted (1363aa)		NCBI GI: 189181720
Description: proteoglycan 4 isoform B		Referenced in: Bone and Related Tissues Ovary, Uterus and Placenta
Other entries for this name: alt prot [1311aa] proteoglycan 4 isoform C alt prot [1270aa] proteoglycan 4 isoform D alt prot [1404aa] proteoglycan 4 isoform A
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 105 3 C cysteine 1.0 14 2 D aspartate 2.4 33 1 E glutamate 7.5 102 2 F phenylalanine 1.5 21 3 G glycine 2.7 37 2 H histidine 0.7 9 1 I isoleucine 2.7 37 3 K lysine 12.0 164 3 L leucine 3.4 47 5 M methionine 1.0 13 1 N asparagine 2.6 35 1 P proline 17.8 242 3 Q glutamine 2.1 28 2 R arginine 2.9 39 4 S serine 6.4 87 12 T threonine 20.7 282 4 V valine 2.9 40 2 W tryptophan 0.5 7 1 Y tyrosine 1.5 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteoglycan 4 isoform B PRG4 0.993 proteoglycan 4 isoform A PRG4 0.887 proteoglycan 4 isoform D PRG4 0.887 proteoglycan 4 isoform C MUC2 0.133 mucin 2 precursor NACA 0.101 nascent polypeptide-associated complex alpha subuni... DPCR1 0.081 diffuse panbronchiolitis critical region 1 protein ... LOC100294420 0.073 PREDICTED: similar to mucin 2 LOC100294236 0.073 PREDICTED: similar to diffuse panbronchiolitis crit... MUC17 0.064 mucin 17 MDC1 0.064 mediator of DNA-damage checkpoint 1 MUC6 0.061 mucin 6, gastric ZAN 0.061 zonadhesin isoform 3 ZAN 0.061 zonadhesin isoform 6 TTN 0.060 titin isoform N2-A MUC4 0.057 mucin 4 isoform a PCLO 0.055 piccolo isoform 2 PCLO 0.055 piccolo isoform 1 LOC284297 0.055 hypothetical protein LOC284297 MUC5AC 0.053 mucin 5AC KIAA0754 0.053 hypothetical protein LOC643314 MUC5B 0.053 mucin 5, subtype B, tracheobronchial MUC3A 0.052 PREDICTED: mucin 3A, intestinal FLJ22184 0.052 PREDICTED: hypothetical protein FLJ22184 MUC12 0.050 PREDICTED: mucin 12 RAPH1 0.050 Ras association and pleckstrin homology domains 1 is... POLR2A 0.049 DNA-directed RNA polymerase II A LOC100131514 0.048 PREDICTED: similar to hCG1747327, partial MUC12 0.048 PREDICTED: mucin 12, cell surface associated MUC12 0.048 PREDICTED: mucin 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.