Guide to the Human Genome
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Name: WIPF1 Sequence: fasta or formatted (503aa) NCBI GI: 38373695
Description:

WAS/WASL interacting protein family, member 1

Referenced in:

Cytoskeleton

Other entries for this name:
alt mRNA [503aa] WAS/WASL interacting protein family, member 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         22           1
 C cysteine            0.2          1           1
 D aspartate           3.2         16           2
 E glutamate           2.4         12           1
 F phenylalanine       2.4         12           1
 G glycine            12.9         65          10
 H histidine           0.8          4           1
 I isoleucine          1.8          9           1
 K lysine              3.2         16           2
 L leucine             5.6         28           2
 M methionine          0.6          3           1
 N asparagine          3.8         19           2
 P proline            28.2        142           7
 Q glutamine           2.4         12           1
 R arginine            8.3         42           2
 S serine             12.5         63           4
 T threonine           4.0         20           2
 V valine              2.6         13           1
 W tryptophan          0.2          1           1
 Y tyrosine            0.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAS/WASL interacting protein family, member 1 
WIPF1                 1.000   WAS/WASL interacting protein family, member 1 [Homo...
WIPF2                 0.263   WIRE protein 
WIPF3                 0.167   WAS/WASL interacting protein family, member 3 [Homo...
FMN2                  0.120   formin 2 
PRB2                  0.119   proline-rich protein BstNI subfamily 2 
PRB1                  0.104   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB3                  0.096   proline-rich protein BstNI subfamily 3 precursor [H...
FLJ22184              0.089   PREDICTED: hypothetical protein LOC80164 
KIAA1522              0.089   hypothetical protein LOC57648 
RAPH1                 0.088   Ras association and pleckstrin homology domains 1 is...
SF1                   0.086   splicing factor 1 isoform 1 
COL3A1                0.085   collagen type III alpha 1 preproprotein 
NACA                  0.085   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.085   PREDICTED: hypothetical protein FLJ22184 
MLL2                  0.084   myeloid/lymphoid or mixed-lineage leukemia 2 
SHANK1                0.084   SH3 and multiple ankyrin repeat domains 1 
MLL4                  0.081   myeloid/lymphoid or mixed-lineage leukemia 4 
SFPQ                  0.081   splicing factor proline/glutamine rich (polypyrimidin...
RERE                  0.081   atrophin-1 like protein isoform b 
RERE                  0.081   atrophin-1 like protein isoform a 
RERE                  0.081   atrophin-1 like protein isoform a 
MUC2                  0.080   mucin 2 precursor 
FLJ22184              0.079   PREDICTED: hypothetical protein FLJ22184 
SF1                   0.078   splicing factor 1 isoform 2 
DIAPH1                0.075   diaphanous 1 isoform 2 
DIAPH1                0.075   diaphanous 1 isoform 1 
CPSF6                 0.075   cleavage and polyadenylation specific factor 6, 68 ...
LOC100293055          0.074   PREDICTED: similar to COL22A1 protein 
BRD4                  0.074   bromodomain-containing protein 4 isoform long 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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