Guide to the Human Genome
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Name: KIAA1522 Sequence: fasta or formatted (1094aa) NCBI GI: 112734870
Description:

hypothetical protein LOC57648

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3        113           2
 C cysteine            0.6          7           1
 D aspartate           3.1         34           2
 E glutamate           5.4         59           2
 F phenylalanine       1.4         15           2
 G glycine             8.9         97           3
 H histidine           1.8         20           1
 I isoleucine          1.5         16           1
 K lysine              4.5         49           3
 L leucine             7.1         78           2
 M methionine          0.8          9           1
 N asparagine          1.4         15           1
 P proline            17.0        186           6
 Q glutamine           4.5         49           2
 R arginine            7.4         81           4
 S serine             13.8        151           4
 T threonine           4.8         52           2
 V valine              4.8         52           3
 W tryptophan          0.5          5           1
 Y tyrosine            0.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57648 
FLJ22184              0.064   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.054   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.053   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.053   nascent polypeptide-associated complex alpha subuni...
RAPH1                 0.048   Ras association and pleckstrin homology domains 1 is...
FMN2                  0.046   formin 2 
PRB2                  0.044   proline-rich protein BstNI subfamily 2 
NHSL1                 0.043   NHS-like 1 
WIPF1                 0.043   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.043   WAS/WASL interacting protein family, member 1 
TTN                   0.041   titin isoform N2-A 
LOC100133756          0.040   PREDICTED: hypothetical protein, partial 
MLL2                  0.040   myeloid/lymphoid or mixed-lineage leukemia 2 
RERE                  0.039   atrophin-1 like protein isoform a 
RERE                  0.039   atrophin-1 like protein isoform a 
PRG4                  0.038   proteoglycan 4 isoform B 
PRG4                  0.038   proteoglycan 4 isoform A 
RERE                  0.038   atrophin-1 like protein isoform b 
PCLO                  0.038   piccolo isoform 2 
PCLO                  0.038   piccolo isoform 1 
MBD6                  0.037   methyl-CpG binding domain protein 6 
MUC2                  0.037   mucin 2 precursor 
PRG4                  0.036   proteoglycan 4 isoform D 
PRG4                  0.036   proteoglycan 4 isoform C 
PRB1                  0.035   proline-rich protein BstNI subfamily 1 isoform 1 pre...
ATN1                  0.034   atrophin-1 
ATN1                  0.034   atrophin-1 
WIPF3                 0.034   WAS/WASL interacting protein family, member 3 [Homo...
PRR12                 0.034   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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